RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 CTBSQ01459 385 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 FMO1Q01740 532 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 BECN1Q14457 450 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 NR1D2Q14995 579 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 LACTB2Q53H82 288 aaPredicted RBP8.03□□□□□ -1.12
CHFR-211ENST00000535897 AFMIDQ63HM1 303 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 RAET1GQ6H3X3 334 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 DPY19L2P1Q6NXN4 242 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 WDR59Q6PJI9 974 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 TRIM72Q6ZMU5 477 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 C17orf82Q86X59 251 aaPredicted RBP8.03□□□□□ -1.12
CHFR-211ENST00000535897 NRROSQ86YC3 692 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 NAGSQ8N159 534 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 PELI3Q8N2H9 469 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 OR10G6Q8NH81 332 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 APOBEC4Q8WW27 367 aaKnown RBP8.03□□□□□ -1.12
CHFR-211ENST00000535897 STARD8Q92502 1023 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 ECHDC3Q96DC8 303 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 ABHD17AQ96GS6 310 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 SLC45A3Q96JT2 553 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 MCEEQ96PE7 176 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 TEFMQ96QE5 360 aaKnown RBP8.03□□□□□ -1.12
CHFR-211ENST00000535897 SLC38A3Q99624 504 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 DPYSL5Q9BPU6 564 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 EFHD1Q9BUP0 239 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 LRRC19Q9H756 370 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 B4GALT6Q9UBX8 382 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 PILRAQ9UKJ1 303 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 FZD10Q9ULW2 581 aa8.03□□□□□ -1.12
CHFR-211ENST00000535897 TRBV23OR9-2A0A075B6M9 112 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 TTC24A2A3L6 582 aaPredicted RBP8.02□□□□□ -1.13
CHFR-211ENST00000535897 WASH4PA8MWX3 477 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 B4E171 279 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 EEF2KO00418 725 aaKnown RBP8.02□□□□□ -1.13
CHFR-211ENST00000535897 MTSS1O43312 755 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 CPP00450 1065 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 GM2AP17900 193 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 TCN2P20062 427 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 NFKBIAP25963 317 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 OAS2P29728 719 aaKnown RBP8.02□□□□□ -1.13
CHFR-211ENST00000535897 SOX5P35711 763 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 ADCY8P40145 1251 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 ETV3P41162 512 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 TSPAN7P41732 249 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 CSNK1DP48730 415 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 ZNF143P52747 638 aaPredicted RBP8.02□□□□□ -1.13
CHFR-211ENST00000535897 AIF1P55008 147 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 POLR2FP61218 127 aaKnown RBP8.02□□□□□ -1.13
CHFR-211ENST00000535897 AP1S1P61966 158 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 GPLD1P80108 840 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 CDK3Q00526 305 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 MC1RQ01726 317 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 KLRB1Q12918 225 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 ZNF235Q14590 738 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 CNGA3Q16281 694 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 ATP1A1-AS1Q5TC04 95 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 TMEM71Q6P5X7 295 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 DCUN1D2Q6PH85 259 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 CEACAM20Q6UY09 585 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 MARK2Q7KZI7 788 aaKnown RBP8.02□□□□□ -1.13
CHFR-211ENST00000535897 TEX19Q8NA77 164 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 C3orf20Q8ND61 904 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 PTCD2Q8WV60 388 aaKnown RBP8.02□□□□□ -1.13
CHFR-211ENST00000535897 COQ10AQ96MF6 247 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 PCMTD1Q96MG8 357 aaPredicted RBP8.02□□□□□ -1.13
CHFR-211ENST00000535897 OR2M4Q96R27 311 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 CNPY3Q9BT09 278 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 TEX101Q9BY14 249 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 SLC39A8Q9C0K1 460 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 VPS16Q9H269 839 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 DHX35Q9H5Z1 703 aaKnown RBP8.02□□□□□ -1.13
CHFR-211ENST00000535897 STN1Q9H668 368 aaKnown RBP8.02□□□□□ -1.13
CHFR-211ENST00000535897 NLRC4Q9NPP4 1024 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 FAM207AQ9NSI2 230 aaPredicted RBP8.02□□□□□ -1.13
CHFR-211ENST00000535897 GPATCH2LQ9NWQ4 482 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 KLHL3Q9UH77 587 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 DACH1Q9UI36 760 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 AP4E1Q9UPM8 1137 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 PLEKHM1Q9Y4G2 1056 aa8.02□□□□□ -1.13
CHFR-211ENST00000535897 LOC101059948A0A1B0GTJ6 334 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.01□□□□□ -1.13
CHFR-211ENST00000535897 CLEC18AA5D8T8 446 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 SIGLEC16A6NMB1 481 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 POLR1CO15160 346 aaPredicted RBP8.01□□□□□ -1.13
CHFR-211ENST00000535897 STK17BO94768 372 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 HEXIM1O94992 359 aaKnown RBP8.01□□□□□ -1.13
CHFR-211ENST00000535897 MAP3K6O95382 1288 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 FUCA1P04066 466 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 TPM2P07951 284 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 KRT7P08729 469 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 UNGP13051 313 aaPredicted RBP8.01□□□□□ -1.13
CHFR-211ENST00000535897 VIPR1P32241 457 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 HTR7P34969 479 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 GPR1P46091 355 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 KLK7P49862 253 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 RENBPP51606 427 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 MLLT10P55197 1068 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 RPL7AP62424 266 aaKnown RBP8.01□□□□□ -1.13
CHFR-211ENST00000535897 IL10RBQ08334 325 aa8.01□□□□□ -1.13
CHFR-211ENST00000535897 NSUN2Q08J23 767 aaKnown RBP eCLIP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms