RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 LTBP2Q14767 1821 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 COL4A1P02462 1669 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 MAST2Q6P0Q8 1798 aa3.46□□□□□ -1.86
SNHG1-202ENST00000535689 ZNF521Q96K83 1311 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 KIF16BQ96L93 1317 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 DOCK2Q92608 1830 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 ATAD5Q96QE3 1844 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 A0A1B0GUL7 405 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 LRRC53A6NM62 1247 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 KCNU1A8MYU2 1149 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 E5RJQ4 531 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 MASP2O00187 686 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 CNOT3O75175 753 aaKnown RBP3.45□□□□□ -1.86
SNHG1-202ENST00000535689 MBD4O95243 580 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 AGR2O95994 175 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 CELA2AP08217 269 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 HNRNPA1P09651 372 aaKnown RBP eCLIP3.45□□□□□ -1.86
SNHG1-202ENST00000535689 PRR35P0CG20 571 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 ITGB8P26012 769 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 MPGP29372 298 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 CCND3P30281 292 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-202ENST00000535689 FMO4P31512 558 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 ARL3P36405 182 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 GYG1P46976 350 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 MTNR1AP48039 350 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 ENTPD1P49961 510 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 RARSP54136 660 aaKnown RBP3.45□□□□□ -1.86
SNHG1-202ENST00000535689 CASP6P55212 293 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 BACE1P56817 501 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 NANOS3P60323 173 aaKnown RBP3.45□□□□□ -1.86
SNHG1-202ENST00000535689 YPEL5P62699 121 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 GSTO1P78417 241 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 MRPS21P82921 87 aaKnown RBP3.45□□□□□ -1.86
SNHG1-202ENST00000535689 GAD2Q05329 585 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 PDE1CQ14123 709 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-202ENST00000535689 VEPH1Q14D04 833 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 TAF11Q15544 211 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 SLC18A3Q16572 532 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 KRTAP15-1Q3LI76 137 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 ZNF766Q5HY98 468 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 CEP78Q5JTW2 689 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 WDR78Q5VTH9 848 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 CDC42EP5Q6NZY7 148 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 LVRNQ6Q4G3 990 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 ANKRD33Q7Z3H0 272 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 MAATS1Q7Z4T9 603 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 GPR142Q7Z601 462 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 TFAP2DQ7Z6R9 452 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 ARFGAP1Q8N6T3 406 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 ETNPPLQ8TBG4 499 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 FAM149B1Q96BN6 582 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 RNF183Q96D59 192 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 PIMREGQ9BSJ6 248 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 GATA5Q9BWX5 397 aaPredicted RBP3.45□□□□□ -1.86
SNHG1-202ENST00000535689 MAF1Q9H063 256 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 Q9N2J8 555 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 PNRC2Q9NPJ4 139 aaKnown RBP3.45□□□□□ -1.86
SNHG1-202ENST00000535689 DIAPH3Q9NSV4 1193 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 ATP8A2Q9NTI2 1148 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 POT1Q9NUX5 634 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 HIF1ANQ9NWT6 349 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 IL36RNQ9UBH0 155 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 CTNNA3Q9UI47 895 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 ICKQ9UPZ9 632 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 PAM16Q9Y3D7 125 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 RAP2CQ9Y3L5 183 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 GBF1Q92538 1859 aa3.45□□□□□ -1.86
SNHG1-202ENST00000535689 A0A087X0M5 115 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 A0A1B0GX30 115 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 A0A1W2PPH5 198 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 TYW5A2RUC4 315 aaKnown RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 EIF3CLB5ME19 914 aaKnown RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 FAM157AC9JC47 383 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 TLX3O43711 291 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 CEP104O60308 925 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 SEC14L2O76054 403 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 RTN3O95197 1032 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 IGKV5-2P06315 115 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 ACTN1P12814 892 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 SLC2A4P14672 509 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 TYK2P29597 1187 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 ABCD1P33897 745 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 MAN1A1P33908 653 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 PTH2RP49190 550 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 RASSF2P50749 326 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 CCR5P51681 352 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 RAD23BP54727 409 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 HMGCS2P54868 508 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 PRAMEP78395 509 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 WDR43Q15061 677 aaKnown RBP eCLIP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 AP5B1Q2VPB7 878 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 MIDNQ504T8 468 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 AWAT1Q58HT5 328 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 ARL13AQ5H913 290 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 MTX3Q5HYI7 312 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 KIAA1755Q5JYT7 1200 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 C10orf25Q5T742 122 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 OTUD1Q5VV17 481 aaPredicted RBP3.44□□□□□ -1.86
SNHG1-202ENST00000535689 SLC22A25Q6T423 547 aa3.44□□□□□ -1.86
SNHG1-202ENST00000535689 KDELC2Q7Z4H8 507 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms