RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	ARHGAP42	A6NI28	874 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	TRAFD1	O14545	582 aa	Predicted RBP	11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	STK10	O94804	968 aa	Known RBP	11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	PCCB	P05166	539 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	CCNYL3	P0C7X3	344 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	SKIL	P12757	684 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	HGF	P14210	728 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	GM2A	P17900	193 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	KLK7	P49862	253 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	RPL7A	P62424	266 aa	Known RBP	11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	SQSTM1	Q13501	440 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	ARHGEF7	Q14155	803 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	NR1D2	Q14995	579 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	CFAP58	Q5T655	872 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	ALG1L	Q6GMV1	187 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	ALKBH2	Q6NS38	261 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	PNCK	Q6P2M8	343 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	DPPA4	Q7L190	304 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	ZNF438	Q7Z4V0	828 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	TAF8	Q7Z7C8	310 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	CBARP	Q8N350	705 aa	Predicted RBP	11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647		Q8N9G6	341 aa	Predicted RBP	11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	GPBAR1	Q8TDU6	330 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	EXOC2	Q96KP1	924 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	FGF22	Q9HCT0	170 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	NLRC4	Q9NPP4	1024 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	IL17B	Q9UHF5	180 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	RNF215	Q9Y6U7	377 aa		11.57	□□□□□ -0.56
CTNND1-238	ENST00000534647	PRAMEF33	A0A0G2JMD5	474 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	TERT	O14746	1132 aa	Known RBP	11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	HGS	O14964	777 aa	Predicted RBP	11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	ZW10	O43264	779 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	SUV39H1	O43463	412 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	B4GAT1	O43505	415 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	ZNF500	O60304	480 aa	Predicted RBP	11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	PRAMEF10	O60809	474 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	PALM	O75781	387 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	CPNE6	O95741	557 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	DES	P17661	470 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	PBX1	P40424	430 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	RGR	P47804	291 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	HCAR3	P49019	387 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	PAPOLA	P51003	745 aa	Known RBP	11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	TPI1	P60174	286 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	BCL2L1	Q07817	233 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	NFATC3	Q12968	1075 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	TBX2	Q13207	712 aa	Predicted RBP	11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	RNF187	Q5TA31	235 aa	Predicted RBP	11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	DNAJC24	Q6P3W2	148 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	TMPRSS9	Q7Z410	1059 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	PIM3	Q86V86	326 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	CNGA4	Q8IV77	575 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	ZSCAN1	Q8NBB4	408 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	KIAA1524	Q8TCG1	905 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	USP7	Q93009	1102 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	IQCD	Q96DY2	449 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	COQ10A	Q96MF6	247 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	MCEE	Q96PE7	176 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	PSKH2	Q96QS6	385 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	AGPAT1	Q99943	283 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	LGR4	Q9BXB1	951 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	SLC39A8	Q9C0K1	460 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	TMEM168	Q9H0V1	697 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	DPEP2	Q9H4A9	486 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	PCDHB11	Q9Y5F2	797 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	HEMK1	Q9Y5R4	338 aa	Predicted RBP	11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	HECTD1	Q9ULT8	2610 aa		11.56	□□□□□ -0.56
CTNND1-238	ENST00000534647	TLN1	Q9Y490	2541 aa	Known RBP	11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	LRP4	O75096	1905 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	UBR5	O95071	2799 aa	Predicted RBP	11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647		A0A1W2PQ67	120 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	PRSS38	A1L453	326 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	C9orf172	C9J069	976 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	ARHGAP6	O43182	974 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	ELFN1	P0C7U0	828 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	MYCLP1	P12525	358 aa	Predicted RBP	11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	CCNB1	P14635	433 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	ITIH1	P19827	911 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	TEAD1	P28347	426 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	ETV5	P41161	510 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	GPR3	P46089	330 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	EIF1AX	P47813	144 aa	Known RBP	11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	RENBP	P51606	427 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	ZNF135	P52742	658 aa	Predicted RBP	11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	AP1S1	P61966	158 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	IL10RB	Q08334	325 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	SYCP1	Q15431	976 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	TBR1	Q16650	682 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	MANEA	Q5SRI9	462 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	ERMARD	Q5T6L9	678 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	ACAD10	Q6JQN1	1059 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	PPP1R2P3	Q6NXS1	205 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	ATG14	Q6ZNE5	492 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	ZFAND4	Q86XD8	727 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	PSTK	Q8IV42	348 aa	Known RBP	11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	ARHGAP12	Q8IWW6	846 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	MCOLN2	Q8IZK6	566 aa		11.55	□□□□□ -0.56
CTNND1-238	ENST00000534647	EXTL1	Q92935	676 aa		11.55	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms