RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 MNAT1P51948 309 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 PTPN5P54829 565 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 CDKN2DP55273 166 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 ATP6V0D1P61421 351 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 CACNG1Q06432 222 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 RAD51Q06609 339 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 PRSS36Q5K4E3 855 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 NAPRTQ6XQN6 538 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 PLPP6Q8IY26 295 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 EFHBQ8N7U6 833 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 PIH1D2Q8WWB5 315 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 IRF7Q92985 503 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 BHMTQ93088 406 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 PTCD3Q96EY7 689 aaKnown RBP13.38□□□□□ -0.27
BEST1-208ENST00000534553 FAR2Q96K12 515 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 LYSMD1Q96S90 227 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 C17orf80Q9BSJ5 609 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 GPR63Q9BZJ6 419 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 TM6SF2Q9BZW4 377 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 POLR3BQ9NW08 1133 aaPredicted RBP13.38□□□□□ -0.27
BEST1-208ENST00000534553 IL17CQ9P0M4 197 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 APPL1Q9UKG1 709 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 TRIM33Q9UPN9 1127 aa13.38□□□□□ -0.27
BEST1-208ENST00000534553 A0A0J9YYE9 177 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 HDAC3O15379 428 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 BUD23O43709 281 aaKnown RBP13.37□□□□□ -0.27
BEST1-208ENST00000534553 RFPL2O75678 378 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 SRP72O76094 671 aaKnown RBP13.37□□□□□ -0.27
BEST1-208ENST00000534553 CBX6O95503 412 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 MT-CO1P00395 513 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 TRBC1P01850 177 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 ESR1P03372 595 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 ESRRAP11474 423 aaPredicted RBP13.37□□□□□ -0.27
BEST1-208ENST00000534553 GMPRP36959 345 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 ABL2P42684 1182 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 PTGER3P43115 390 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 NAGLUP54802 743 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 ELF3P78545 371 aaPredicted RBP13.37□□□□□ -0.27
BEST1-208ENST00000534553 ZNF77Q15935 545 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 ATXN7L2Q5T6C5 722 aaPredicted RBP13.37□□□□□ -0.27
BEST1-208ENST00000534553 LYPLAL1Q5VWZ2 237 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 SEL1L3Q68CR1 1132 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 UGT3A1Q6NUS8 523 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 LDB1Q86U70 411 aaPredicted RBP13.37□□□□□ -0.27
BEST1-208ENST00000534553 ALYREFQ86V81 257 aaKnown RBP13.37□□□□□ -0.27
BEST1-208ENST00000534553 NKAPQ8N5F7 415 aaKnown RBP13.37□□□□□ -0.27
BEST1-208ENST00000534553 PAF1Q8N7H5 531 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 SLC7A6OSQ96CW6 309 aaPredicted RBP13.37□□□□□ -0.27
BEST1-208ENST00000534553 ASB2Q96Q27 587 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 CPEB1Q9BZB8 566 aaKnown RBP13.37□□□□□ -0.27
BEST1-208ENST00000534553 MCOLN1Q9GZU1 580 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 TFB2MQ9H5Q4 396 aaKnown RBP13.37□□□□□ -0.27
BEST1-208ENST00000534553 TLE6Q9H808 572 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 SPHK2Q9NRA0 654 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 PLK2Q9NYY3 685 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 PCDHB1Q9Y5F3 818 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 SLC30A1Q9Y6M5 507 aa13.37□□□□□ -0.27
BEST1-208ENST00000534553 UBA6A0AVT1 1052 aaPredicted RBP13.36□□□□□ -0.27
BEST1-208ENST00000534553 CAPN8A6NHC0 703 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 CAPN14A8MX76 684 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 MATN2O00339 956 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 ZNF195O14628 629 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 SMIM24O75264 130 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 VPS26AO75436 327 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 TPBGLP0DKB5 382 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 SRCP12931 536 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 TFEBP19484 476 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 AOC1P19801 751 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 HLA-FP30511 346 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 SLC8A1P32418 973 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 SEMA3AQ14563 771 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 PTPRCAPQ14761 206 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 HSF5Q4G112 596 aaPredicted RBP13.36□□□□□ -0.27
BEST1-208ENST00000534553 ARL13AQ5H913 290 aaPredicted RBP13.36□□□□□ -0.27
BEST1-208ENST00000534553 FBXW10Q5XX13 1052 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 ZNF549Q6P9A3 640 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 EPGNQ6UW88 154 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 PARP9Q8IXQ6 854 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 ARHGAP24Q8N264 748 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 CBARPQ8N350 705 aaPredicted RBP13.36□□□□□ -0.27
BEST1-208ENST00000534553 ZNF781Q8N8C0 355 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 KCNJ9Q92806 393 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 TCEAL4Q96EI5 215 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 ZNF641Q96N77 438 aaPredicted RBP13.36□□□□□ -0.27
BEST1-208ENST00000534553 BTBD10Q9BSF8 475 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 BBS2Q9BXC9 721 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 DERL2Q9GZP9 239 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 ZFYVE1Q9HBF4 777 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 PNPOQ9NVS9 261 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.36□□□□□ -0.27
BEST1-208ENST00000534553 FKBPLQ9UIM3 349 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 INTS6Q9UL03 887 aaKnown RBP13.36□□□□□ -0.27
BEST1-208ENST00000534553 TMCO1Q9UM00 188 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 CCL26Q9Y258 94 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 K7ERQ8 282 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 SLC22A2O15244 555 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 SMAD6O43541 496 aaKnown RBP13.36□□□□□ -0.27
BEST1-208ENST00000534553 RHOBTB1O94844 696 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 PIGNO95427 931 aa13.36□□□□□ -0.27
BEST1-208ENST00000534553 PAPLNO95428 1278 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms