RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 WDR92Q96MX6 357 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 TLR10Q9BXR5 811 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 TEX101Q9BY14 249 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 ABCG8Q9H221 673 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 TCEAL2Q9H3H9 227 aaPredicted RBP20.42■□□□□ 0.86
CCS-208ENST00000533244 WDR26Q9H7D7 661 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 MAGEE1Q9HCI5 957 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 FTSJ1Q9UET6 329 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 RSPH14Q9UHP6 348 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 CSNK1G3Q9Y6M4 447 aa20.42■□□□□ 0.86
CCS-208ENST00000533244 C1orf232A0A0U1RR37 186 aa20.41■□□□□ 0.86
CCS-208ENST00000533244 TRIM38O00635 465 aa20.41■□□□□ 0.86
CCS-208ENST00000533244 SCAMP1O15126 338 aa20.41■□□□□ 0.86
CCS-208ENST00000533244 PTMAP06454 111 aaKnown RBP20.41■□□□□ 0.86
CCS-208ENST00000533244 ATXN1LP0C7T5 689 aaKnown RBP20.41■□□□□ 0.86
CCS-208ENST00000533244 FTH1P19P0C7X4 201 aa20.41■□□□□ 0.86
CCS-208ENST00000533244 MPP3Q13368 585 aa20.41■□□□□ 0.86
CCS-208ENST00000533244 ALG11Q2TAA5 492 aa20.41■□□□□ 0.86
CCS-208ENST00000533244 ITPRIPL1Q6GPH6 555 aa20.41■□□□□ 0.86
CCS-208ENST00000533244 KDELC2Q7Z4H8 507 aa20.41■□□□□ 0.86
CCS-208ENST00000533244 SLC13A5Q86YT5 568 aaPredicted RBP20.41■□□□□ 0.86
CCS-208ENST00000533244 ATL2Q8NHH9 583 aa20.41■□□□□ 0.86
CCS-208ENST00000533244 EID2BQ96D98 161 aa20.41■□□□□ 0.86
CCS-208ENST00000533244 SPATA13Q96N96 652 aa20.41■□□□□ 0.86
CCS-208ENST00000533244 WDR24Q96S15 920 aa20.41■□□□□ 0.86
CCS-208ENST00000533244 LGR4Q9BXB1 951 aa20.41■□□□□ 0.86
CCS-208ENST00000533244 APOBEC3BQ9UH17 382 aaKnown RBP20.41■□□□□ 0.86
CCS-208ENST00000533244 C5orf60A6NFR6 353 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 TMEM202A6NGA9 273 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 CACNB4O00305 520 aaPredicted RBP20.4■□□□□ 0.86
CCS-208ENST00000533244 LDOC1O95751 146 aaPredicted RBP20.4■□□□□ 0.86
CCS-208ENST00000533244 MYCLP1P12525 358 aaPredicted RBP20.4■□□□□ 0.86
CCS-208ENST00000533244 SPINT3P49223 89 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 HK3P52790 923 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 PPARDQ03181 441 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 PROX2Q3B8N5 592 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 KCTD16Q68DU8 428 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 ENPP7Q6UWV6 458 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 NYAP1Q6ZVC0 841 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 LYSMD3Q7Z3D4 306 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 SLCO6A1Q86UG4 719 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 HEATR4Q86WZ0 1026 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 REXO1L1PQ8IX06 675 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 KLHDC8BQ8IXV7 354 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 ANP32BQ92688 251 aaKnown RBP20.4■□□□□ 0.86
CCS-208ENST00000533244 SCAMP4Q969E2 229 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 CNDP2Q96KP4 475 aaKnown RBP20.4■□□□□ 0.86
CCS-208ENST00000533244 LRRC61Q9BV99 259 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 FGF22Q9HCT0 170 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 NLGN3Q9NZ94 848 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 SPASTQ9UBP0 616 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 CD84Q9UIB8 345 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 DGKBQ9Y6T7 804 aa20.4■□□□□ 0.86
CCS-208ENST00000533244 RGSL1A5PLK6 1076 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 NEMP2A6NFY4 417 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 F5H423 210 aaPredicted RBP20.39■□□□□ 0.85
CCS-208ENST00000533244 TNFRSF10CO14798 259 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 AQP9O43315 295 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 STK10O94804 968 aaKnown RBP20.39■□□□□ 0.85
CCS-208ENST00000533244 KELP23276 732 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 BLKP51451 505 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 RAET1GQ6H3X3 334 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 ADAMTSL4Q6UY14 1074 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 TMC3Q7Z5M5 1100 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 OR56A4Q8NGH8 313 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 TSACCQ96A04 125 aaPredicted RBP20.39■□□□□ 0.85
CCS-208ENST00000533244 AP2M1Q96CW1 435 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 PDXPQ96GD0 296 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 SRPK1Q96SB4 655 aaKnown RBP20.39■□□□□ 0.85
CCS-208ENST00000533244 FRMD8P1Q9BZ68 369 aaPredicted RBP20.39■□□□□ 0.85
CCS-208ENST00000533244 ZFYVE1Q9HBF4 777 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 PHPT1Q9NRX4 125 aaPredicted RBP20.39■□□□□ 0.85
CCS-208ENST00000533244 NFKBIL1Q9UBC1 381 aaPredicted RBP20.39■□□□□ 0.85
CCS-208ENST00000533244 KLQ9UEF7 1012 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 APOBEC2Q9Y235 224 aaKnown RBP20.39■□□□□ 0.85
CCS-208ENST00000533244 ZNF711Q9Y462 761 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 SPEGQ15772 3267 aa20.39■□□□□ 0.85
CCS-208ENST00000533244 PDE2AO00408 941 aaPredicted RBP20.38■□□□□ 0.85
CCS-208ENST00000533244 ENC1O14682 589 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 SIGLEC6O43699 453 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 ANXA9O76027 345 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 RASGRP1O95267 797 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 TRIM16O95361 564 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 PIRTP0C851 137 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 PSMB4P28070 264 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 GEMP55040 296 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 SRP54P61011 504 aaKnown RBP20.38■□□□□ 0.85
CCS-208ENST00000533244 SHC2P98077 582 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 CDK3Q00526 305 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 OASLQ15646 514 aaKnown RBP20.38■□□□□ 0.85
CCS-208ENST00000533244 SIRPB2Q5JXA9 342 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 HENMT1Q5T8I9 393 aaKnown RBP20.38■□□□□ 0.85
CCS-208ENST00000533244 FAXCQ5TGI0 409 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 CCDC70Q6NSX1 233 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 RAB44Q7Z6P3 723 aaPredicted RBP20.38■□□□□ 0.85
CCS-208ENST00000533244 IPMKQ8NFU5 416 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 CCDC110Q8TBZ0 833 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 CCHCR1Q8TD31 782 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 ADAMTS14Q8WXS8 1223 aa20.38■□□□□ 0.85
CCS-208ENST00000533244 OR1E3Q8WZA6 343 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms