RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 ZFAND4Q86XD8 727 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 CBARPQ8N350 705 aaPredicted RBP17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 ATPAF2Q8N5M1 289 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 KIAA1524Q8TCG1 905 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 ZDHHC1Q8WTX9 485 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 PATE1Q8WXA2 126 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 BTBD6Q96KE9 485 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 NAP1L5Q96NT1 182 aaPredicted RBP17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 SMIM14Q96QK8 99 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 ISCUQ9H1K1 167 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 GOLGA6AQ9NYA3 693 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 TAAR2Q9P1P5 351 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 SUFUQ9UMX1 484 aa17.07■□□□□ 0.32
RPUSD4-207ENST00000532800 A0A1W2PQ67 120 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 A0A1W2PQC6 194 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 B8ZZF3 427 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 C9orf172C9J069 976 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 GOLGA6L22H0YM25 854 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 MBD3O95983 291 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 FGF1P05230 155 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 MYBL1P10243 752 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 CTPS1P17812 591 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 POLD2P49005 469 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 ILF3Q12906 894 aaKnown RBP eCLIP17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 FILIP1LQ4L180 1135 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 RAET1GQ6H3X3 334 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 SLC30A9Q6PML9 568 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 ZNF438Q7Z4V0 828 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 VASH2Q86V25 355 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 C17orf82Q86X59 251 aaPredicted RBP17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 USP7Q93009 1102 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 TRIM11Q96F44 468 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 CMKLR1Q99788 373 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 BPIFA3Q9BQP9 254 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 NUDT22Q9BRQ3 303 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 GSDMCQ9BYG8 508 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 NAT10Q9H0A0 1025 aaKnown RBP17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 PCDH18Q9HCL0 1135 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 MRPL47Q9HD33 250 aaKnown RBP17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 PHTF1Q9UMS5 762 aa17.06■□□□□ 0.32
RPUSD4-207ENST00000532800 A0A1B0GTH6 734 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 PGLSO95336 258 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 ECEL1O95672 775 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 CYP2A6P11509 494 aaPredicted RBP17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 ALDH4A1P30038 563 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 MMP13P45452 471 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 SLC25A11Q02978 314 aaKnown RBP17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 LINC00303Q3SY05 128 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 BOLA3Q53S33 107 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 DOK6Q6PKX4 331 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 USP53Q70EK8 1073 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 EXD3Q8N9H8 876 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 TMEM159Q96B96 161 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 SCRN2Q96FV2 425 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 MCCC1Q96RQ3 725 aaPredicted RBP17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 TRNAU1APQ9NX07 287 aaKnown RBP17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 CD84Q9UIB8 345 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 PLEKHM1Q9Y4G2 1056 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 SDK2Q58EX2 2172 aa17.05■□□□□ 0.32
RPUSD4-207ENST00000532800 ZFC3H1O60293 1989 aaKnown RBP17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 BSNQ9UPA5 3926 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 RHPN2P1A8MT19 583 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 PSMD11O00231 422 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 CPNE6O95741 557 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 SOD1P00441 154 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 PDHA1P08559 390 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 CCL4P13236 92 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 WT1P19544 449 aaPredicted RBP17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 ADCY8P40145 1251 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 CTBSQ01459 385 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 MMRN1Q13201 1228 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 NR1D2Q14995 579 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 TDRD12Q587J7 1177 aaKnown RBP17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 ARMC12Q5T9G4 340 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 MARC1Q5VT66 337 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 ZNF574Q6ZN55 896 aaPredicted RBP17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 TECPR1Q7Z6L1 1165 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 TRIM74Q86UV6 250 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 PIM3Q86V86 326 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 NAGSQ8N159 534 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 BBS5Q8N3I7 341 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 RCBTB1Q8NDN9 531 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 PIH1D2Q8WWB5 315 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 EXTL1Q92935 676 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 SGF29Q96ES7 293 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 THAP2Q9H0W7 228 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 NT5MQ9NPB1 228 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 SLC17A4Q9Y2C5 497 aa17.04■□□□□ 0.32
RPUSD4-207ENST00000532800 SMTNL1A8MU46 457 aa17.03■□□□□ 0.32
RPUSD4-207ENST00000532800 MFSD11O43934 449 aa17.03■□□□□ 0.32
RPUSD4-207ENST00000532800 IVLP07476 585 aa17.03■□□□□ 0.32
RPUSD4-207ENST00000532800 CD48P09326 243 aa17.03■□□□□ 0.32
RPUSD4-207ENST00000532800 SERPINB6P35237 376 aa17.03■□□□□ 0.32
RPUSD4-207ENST00000532800 GPR1P46091 355 aa17.03■□□□□ 0.32
RPUSD4-207ENST00000532800 CDH6P55285 790 aa17.03■□□□□ 0.32
RPUSD4-207ENST00000532800 PIGHQ14442 188 aaPredicted RBP17.03■□□□□ 0.32
RPUSD4-207ENST00000532800 IHHQ14623 411 aa17.03■□□□□ 0.32
RPUSD4-207ENST00000532800 MANEAQ5SRI9 462 aa17.03■□□□□ 0.32
RPUSD4-207ENST00000532800 HGSNATQ68CP4 663 aa17.03■□□□□ 0.32
RPUSD4-207ENST00000532800 LRRC66Q68CR7 880 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms