RNA–Protein interactions for RNA: ENST00000532560.5

CPSF1-208, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-208ENST00000532560 ANKRD20A2Q5SQ80 823 aa15.02■□□□□ -0
CPSF1-208ENST00000532560 N4BP2L1Q5TBK1 243 aaPredicted RBP15.02■□□□□ -0
CPSF1-208ENST00000532560 ANKRD20A1Q5TYW2 823 aa15.02■□□□□ -0
CPSF1-208ENST00000532560 ANKRD20A3Q5VUR7 823 aa15.02■□□□□ -0
CPSF1-208ENST00000532560 NLRP8Q86W28 1048 aa15.02■□□□□ -0
CPSF1-208ENST00000532560 NRSN1Q8IZ57 195 aa15.02■□□□□ -0
CPSF1-208ENST00000532560 PELI3Q8N2H9 469 aa15.02■□□□□ -0
CPSF1-208ENST00000532560 ZNF548Q8NEK5 533 aaPredicted RBP15.02■□□□□ -0
CPSF1-208ENST00000532560 MRGPRX2Q96LB1 330 aa15.02■□□□□ -0
CPSF1-208ENST00000532560 WDR92Q96MX6 357 aa15.02■□□□□ -0
CPSF1-208ENST00000532560 SRPK1Q96SB4 655 aaKnown RBP15.02■□□□□ -0
CPSF1-208ENST00000532560 GORASP1Q9BQQ3 440 aa15.02■□□□□ -0
CPSF1-208ENST00000532560 MAGEE1Q9HCI5 957 aa15.02■□□□□ -0
CPSF1-208ENST00000532560 KLF15Q9UIH9 416 aa15.02■□□□□ -0
CPSF1-208ENST00000532560 LRP4O75096 1905 aa15.02□□□□□ -0.01
CPSF1-208ENST00000532560 SPAARA0A1B0GVQ0 90 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 C5orf60A6NFR6 353 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 GOLGA8CPA6NN73 597 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 K7ESM1 405 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 CACNB4O00305 520 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-208ENST00000532560 ZSCAN12O43309 604 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 ANXA9O76027 345 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 ATXN1LP0C7T5 689 aaKnown RBP15.01□□□□□ -0.01
CPSF1-208ENST00000532560 MYCLP1P12525 358 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-208ENST00000532560 JUNDP17535 347 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 TNNT3P45378 269 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-208ENST00000532560 GEMP55040 296 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 ZNF542PQ5EBM4 170 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 CCDC70Q6NSX1 233 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 LYSMD3Q7Z3D4 306 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 KDELC2Q7Z4H8 507 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 REXO1L1PQ8IX06 675 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 PHACTR4Q8IZ21 702 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 SLC25A45Q8N413 288 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 CCDC110Q8TBZ0 833 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 BTN2A2Q8WVV5 523 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 FUBP1Q96AE4 644 aaKnown RBP15.01□□□□□ -0.01
CPSF1-208ENST00000532560 PPP1R2P1Q96PQ5 205 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 UCKL1Q9NWZ5 548 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 PKD2L2Q9NZM6 624 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 FTSJ1Q9UET6 329 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 APOBEC3BQ9UH17 382 aaKnown RBP15.01□□□□□ -0.01
CPSF1-208ENST00000532560 PNMA8BQ9ULN7 279 aaPredicted RBP15.01□□□□□ -0.01
CPSF1-208ENST00000532560 ZNF711Q9Y462 761 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 CSNK1G3Q9Y6M4 447 aa15.01□□□□□ -0.01
CPSF1-208ENST00000532560 SPTBN2O15020 2390 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 RGSL1A5PLK6 1076 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 F5H423 210 aaPredicted RBP15□□□□□ -0.01
CPSF1-208ENST00000532560 PDE2AO00408 941 aaPredicted RBP15□□□□□ -0.01
CPSF1-208ENST00000532560 TNFSF14O43557 240 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 SOD1P00441 154 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 PYGLP06737 847 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 HLA-DPA1P20036 260 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 KELP23276 732 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 PSMB4P28070 264 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 SPINT3P49223 89 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 BLKP51451 505 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 CDK3Q00526 305 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 PPARDQ03181 441 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 OASLQ15646 514 aaKnown RBP15□□□□□ -0.01
CPSF1-208ENST00000532560 SLC1A5Q15758 541 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 ALG11Q2TAA5 492 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 RAET1GQ6H3X3 334 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 RFLNAQ6ZTI6 216 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 HEATR4Q86WZ0 1026 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 KLHDC8BQ8IXV7 354 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 RBFAQ8N0V3 343 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 EID2Q8N6I1 236 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 FAM71DQ8N9W8 422 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 IPMKQ8NFU5 416 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 OR4C6Q8NH72 309 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 CCHCR1Q8TD31 782 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 ATG4AQ8WYN0 398 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 AP2M1Q96CW1 435 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 RTP4Q96DX8 246 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 LRRC61Q9BV99 259 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 FSD1LQ9BXM9 530 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 TEX101Q9BY14 249 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 SLC13A1Q9BZW2 595 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 ABCG8Q9H221 673 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 CAAP1Q9H8G2 361 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 ZFYVE1Q9HBF4 777 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 PHPT1Q9NRX4 125 aaPredicted RBP15□□□□□ -0.01
CPSF1-208ENST00000532560 NLGN3Q9NZ94 848 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 SPASTQ9UBP0 616 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 KLQ9UEF7 1012 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 CD84Q9UIB8 345 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 DGKBQ9Y6T7 804 aa15□□□□□ -0.01
CPSF1-208ENST00000532560 ARID1BQ8NFD5 2236 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-208ENST00000532560 NEMP2A6NFY4 417 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 TNFRSF10CO14798 259 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 SCAMP1O15126 338 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 CTIFO43310 598 aaKnown RBP14.99□□□□□ -0.01
CPSF1-208ENST00000532560 AQP9O43315 295 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 LIASO43766 372 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 GCATO75600 419 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 RASGRP1O95267 797 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 FGF1P05230 155 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 FTH1P19P0C7X4 201 aa14.99□□□□□ -0.01
CPSF1-208ENST00000532560 PIRTP0C851 137 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms