RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 HTR3DQ70Z44 454 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 MRPL43Q8N983 215 aaKnown RBP15.19■□□□□ 0.02
SRPRA-206ENST00000532259 SHKBP1Q8TBC3 707 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 RDH11Q8TC12 318 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 PTERQ96BW5 349 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 CCDC97Q96F63 343 aaPredicted RBP15.19■□□□□ 0.02
SRPRA-206ENST00000532259 DENND2DQ9H6A0 471 aaPredicted RBP15.19■□□□□ 0.02
SRPRA-206ENST00000532259 RETREG1Q9H6L5 497 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 ASAH2Q9NR71 780 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 NLE1Q9NVX2 485 aaPredicted RBP15.19■□□□□ 0.02
SRPRA-206ENST00000532259 DNMT3BQ9UBC3 853 aaKnown RBP15.19■□□□□ 0.02
SRPRA-206ENST00000532259 GALPQ9UBC7 116 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 ASB3Q9Y575 518 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 TRAV19A0A0A6YYK7 116 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 TRAFD1O14545 582 aaPredicted RBP15.19■□□□□ 0.02
SRPRA-206ENST00000532259 PER2O15055 1255 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 SKAP2O75563 359 aaPredicted RBP15.19■□□□□ 0.02
SRPRA-206ENST00000532259 EPCAMP16422 314 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 MC4RP32245 332 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 RPL14P50914 215 aaKnown RBP15.19■□□□□ 0.02
SRPRA-206ENST00000532259 CAMK1Q14012 370 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 TEAD2Q15562 447 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 SH2D4BQ5SQS7 431 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 TMEM198Q66K66 360 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 KLC3Q6P597 504 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 SDCCAG8Q86SQ7 713 aaPredicted RBP15.19■□□□□ 0.02
SRPRA-206ENST00000532259 FAM217AQ8IXS0 508 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 ST13P5Q8NFI4 369 aaPredicted RBP15.19■□□□□ 0.02
SRPRA-206ENST00000532259 TSPAN17Q96FV3 270 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 UBXN10Q96LJ8 280 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 ADGRE3Q9BY15 652 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 TNFRSF12AQ9NP84 129 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 DNAJC28Q9NX36 388 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 TAGLN3Q9UI15 199 aa15.19■□□□□ 0.02
SRPRA-206ENST00000532259 A8MT66 165 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 GRXCR1A8MXD5 290 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 BMPR1AP36894 532 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 POLD2P49005 469 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 CLCN4P51793 760 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 PDAP1Q13442 181 aaKnown RBP15.18■□□□□ 0.02
SRPRA-206ENST00000532259 TAF1AQ15573 450 aaPredicted RBP15.18■□□□□ 0.02
SRPRA-206ENST00000532259 PPM1LQ5SGD2 360 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 SEL1L3Q68CR1 1132 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 EPGNQ6UW88 154 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 TMEM25Q86YD3 366 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 ELMOD1Q8N336 334 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 SCG3Q8WXD2 468 aaKnown RBP15.18■□□□□ 0.02
SRPRA-206ENST00000532259 RAD9AQ99638 391 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 NCKIPSDQ9NZQ3 722 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 RAP2CQ9Y3L5 183 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 SLC4A7Q9Y6M7 1214 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 NOTCH4Q99466 2003 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 MYO9BQ13459 2157 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 LRRC14BA6NHZ5 514 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 H3BMM5 538 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 TRIM24O15164 1050 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 STX7O15400 261 aaKnown RBP15.18■□□□□ 0.02
SRPRA-206ENST00000532259 MOSPD3O75425 235 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 NDUFS3O75489 264 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 SRP72O76094 671 aaKnown RBP15.18■□□□□ 0.02
SRPRA-206ENST00000532259 RHOBTB1O94844 696 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 LPOP22079 712 aaPredicted RBP15.18■□□□□ 0.02
SRPRA-206ENST00000532259 ATP5F1P24539 256 aaPredicted RBP15.18■□□□□ 0.02
SRPRA-206ENST00000532259 SERPINB5P36952 375 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 SLC25A3Q00325 362 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 CBX2Q14781 532 aaPredicted RBP15.18■□□□□ 0.02
SRPRA-206ENST00000532259 ASTLQ6HA08 431 aaPredicted RBP15.18■□□□□ 0.02
SRPRA-206ENST00000532259 FAM45BPQ6NSW5 357 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 CCDC149Q6ZUS6 474 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 TAS2R42Q7RTR8 314 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 LYSMD3Q7Z3D4 306 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 DCAF4L2Q8NA75 395 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 FAM45AQ8TCE6 357 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 SPPL3Q8TCT6 385 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 GCNAQ96QF7 691 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 LINC00597Q9H2U6 94 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 SARS2Q9NP81 518 aaKnown RBP15.18■□□□□ 0.02
SRPRA-206ENST00000532259 ABCB8Q9NUT2 735 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 NKX1-2Q9UD57 310 aaPredicted RBP15.18■□□□□ 0.02
SRPRA-206ENST00000532259 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.18■□□□□ 0.02
SRPRA-206ENST00000532259 MED16Q9Y2X0 877 aa15.18■□□□□ 0.02
SRPRA-206ENST00000532259 SPTBN5Q9NRC6 3674 aaKnown RBP15.18■□□□□ 0.02
SRPRA-206ENST00000532259 ALPK3Q96L96 1907 aa15.17■□□□□ 0.02
SRPRA-206ENST00000532259 IQCF5A8MTL0 148 aa15.17■□□□□ 0.02
SRPRA-206ENST00000532259 SPECC1L-ADORA2AF8WAN1 911 aa15.17■□□□□ 0.02
SRPRA-206ENST00000532259 MATN2O00339 956 aa15.17■□□□□ 0.02
SRPRA-206ENST00000532259 GRID2O43424 1007 aa15.17■□□□□ 0.02
SRPRA-206ENST00000532259 ZNF821O75541 412 aaPredicted RBP15.17■□□□□ 0.02
SRPRA-206ENST00000532259 WISP3O95389 354 aaPredicted RBP15.17■□□□□ 0.02
SRPRA-206ENST00000532259 LATS1O95835 1130 aa15.17■□□□□ 0.02
SRPRA-206ENST00000532259 CDC25CP30307 473 aa15.17■□□□□ 0.02
SRPRA-206ENST00000532259 CA5AP35218 305 aa15.17■□□□□ 0.02
SRPRA-206ENST00000532259 PPIGQ13427 754 aaKnown RBP eCLIP15.17■□□□□ 0.025e-7■■■■□ 25.7
SRPRA-206ENST00000532259 INO80DQ53TQ3 878 aaPredicted RBP15.17■□□□□ 0.02
SRPRA-206ENST00000532259 DGKKQ5KSL6 1271 aa15.17■□□□□ 0.02
SRPRA-206ENST00000532259 FAM109BQ6ICB4 259 aaPredicted RBP15.17■□□□□ 0.02
SRPRA-206ENST00000532259 ISCA2Q86U28 154 aa15.17■□□□□ 0.02
SRPRA-206ENST00000532259 C7orf61Q8IZ16 206 aa15.17■□□□□ 0.02
SRPRA-206ENST00000532259 ZSWIM3Q96MP5 696 aa15.17■□□□□ 0.02
SRPRA-206ENST00000532259 TUBB6Q9BUF5 446 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms