RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 MRGBPQ9NV56 204 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 INTS7Q9NVH2 962 aaKnown RBP7.96□□□□□ -1.14
CTNND1-230ENST00000532245 ARL5AQ9Y689 179 aa7.96□□□□□ -1.14
CTNND1-230ENST00000532245 NRAPQ86VF7 1730 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 AP2A1O95782 977 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 PKMP14618 531 aaKnown RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 CHRNA4P43681 627 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 CLNS1AP54105 237 aaKnown RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 STX5Q13190 355 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 RFTN1Q14699 578 aaPredicted RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 DPYSL2Q16555 572 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 SNX30Q5VWJ9 437 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 CPNE8Q86YQ8 564 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 FAM46DQ8NEK8 389 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 USP7Q93009 1102 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 TPSD1Q9BZJ3 242 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 CCDC90BQ9GZT6 254 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 TRIT1Q9H3H1 467 aaKnown RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 TMBIM4Q9HC24 238 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 PNPLA8Q9NP80 782 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 KCTD5Q9NXV2 234 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 SNX6Q9UNH7 406 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 GRIN2DO15399 1336 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 H0YGN5 161 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 OAZ2O95190 189 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 KAT7O95251 611 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 SERPINE1P05121 402 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 DLDP09622 509 aaKnown RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 IL1R2P27930 398 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 GKP32189 559 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 ARRB1P49407 418 aaPredicted RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 AFF1P51825 1210 aaKnown RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 MAD2L1Q13257 205 aaPredicted RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 INAVAQ3KP66 663 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 AGKQ53H12 422 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 SCIMPQ6UWF3 145 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 LRRC34Q8IZ02 419 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 PCDH20Q8N6Y1 951 aaKnown RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 OTUB2Q96DC9 234 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 C12orf66Q96MD2 445 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 GBP5Q96PP8 586 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 CACNA1SQ13698 1873 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 A0A0D9SEW6 157 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 MTX2O75431 263 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 GOT2P00505 430 aaKnown RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 NTSP30990 170 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 DHCR24Q15392 516 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 AP5B1Q2VPB7 878 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 C22orf39Q6P5X5 142 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 DSELQ8IZU8 1212 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 TRIML2Q8N7C3 387 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 MRPL43Q8N983 215 aaKnown RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 LMX1AQ8TE12 382 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 HEY2Q9UBP5 337 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 PSME2Q9UL46 239 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 DDX60Q8IY21 1712 aaKnown RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 SLCO1B7G3V0H7 640 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 ERAL1O75616 437 aaKnown RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 ITGA2BP08514 1039 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 ALADP13716 330 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 COX7A2P14406 83 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 TCF4P15884 667 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 SERPINB4P48594 390 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 TXNDC5Q8NBS9 432 aaKnown RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 TNIP2Q8NFZ5 429 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 ZNF473Q8WTR7 871 aaKnown RBP7.95□□□□□ -1.14
CTNND1-230ENST00000532245 FAM3CQ92520 227 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 LMAN2LQ9H0V9 348 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 SRMSQ9H3Y6 488 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 ANKZF1Q9H8Y5 726 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 CDH7Q9ULB5 785 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 EFR3BQ9Y2G0 817 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 ZNF711Q9Y462 761 aa7.95□□□□□ -1.14
CTNND1-230ENST00000532245 HIDE1A8MVS5 230 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 SGTAO43765 313 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 CCNDBP1O95273 360 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 HLA-DQB2P05538 268 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 PPP2R1BP30154 601 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 HPCAL1P37235 193 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 PWP1Q13610 501 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 SUZ12Q15022 739 aaKnown RBP7.94□□□□□ -1.14
CTNND1-230ENST00000532245 RASIP1Q5U651 963 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 CAPN13Q6MZZ7 669 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-230ENST00000532245 CDYL2Q8N8U2 506 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 SORCS1Q8WY21 1168 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 MFSD3Q96ES6 412 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 GPR21Q99679 349 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 GPR174Q9BXC1 333 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 ATG10Q9H0Y0 220 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 HCFC2Q9Y5Z7 792 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 ATP6V1C1P21283 382 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 CD72P21854 359 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 GTF2E2P29084 291 aaKnown RBP7.94□□□□□ -1.14
CTNND1-230ENST00000532245 EEF1DP29692 281 aaKnown RBP7.94□□□□□ -1.14
CTNND1-230ENST00000532245 LSP1P33241 339 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 RPIAP49247 311 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 STK19P49842 368 aaPredicted RBP7.94□□□□□ -1.14
CTNND1-230ENST00000532245 SLC16A1P53985 500 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 NAGLUP54802 743 aa7.94□□□□□ -1.14
CTNND1-230ENST00000532245 USP46P62068 366 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms