RNA–Protein interactions for RNA: ENST00000531872.5

NXF1-212, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 390 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-212ENST00000531872 SEMA5AQ13591 1074 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 ERV3-1Q14264 604 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 EIF2S3LQ2VIR3 472 aaKnown RBP7.78□□□□□ -1.16
NXF1-212ENST00000531872 C2CD6Q53TS8 623 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.78□□□□□ -1.16
NXF1-212ENST00000531872 CFAP58Q5T655 872 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 C1QL3Q5VWW1 255 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 TMEM135Q86UB9 458 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 ZNF354CQ86Y25 554 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 FAM71AQ8IYT1 594 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 EMC1Q8N766 993 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 RTL3Q8N8U3 475 aaKnown RBP7.78□□□□□ -1.16
NXF1-212ENST00000531872 OR10G6Q8NH81 332 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 NELFBQ8WX92 580 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 SCARF2Q96GP6 870 aaPredicted RBP7.78□□□□□ -1.16
NXF1-212ENST00000531872 AHCYL2Q96HN2 611 aaKnown RBP7.78□□□□□ -1.16
NXF1-212ENST00000531872 COQ10AQ96MF6 247 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 PHF12Q96QT6 1004 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 SUDS3Q9H7L9 328 aaPredicted RBP7.78□□□□□ -1.16
NXF1-212ENST00000531872 PDFQ9HBH1 243 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 MLXIPLQ9NP71 852 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 CASS4Q9NQ75 786 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 PHPT1Q9NRX4 125 aaPredicted RBP7.78□□□□□ -1.16
NXF1-212ENST00000531872 SIDT1Q9NXL6 827 aaKnown RBP7.78□□□□□ -1.16
NXF1-212ENST00000531872 DONSONQ9NYP3 566 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 AJAP1Q9UKB5 411 aaPredicted RBP7.78□□□□□ -1.16
NXF1-212ENST00000531872 CROTQ9UKG9 612 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 SLC17A4Q9Y2C5 497 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 ZDHHC9Q9Y397 364 aa7.78□□□□□ -1.16
NXF1-212ENST00000531872 OAS3Q9Y6K5 1087 aaKnown RBP7.78□□□□□ -1.16
NXF1-212ENST00000531872 BICDL2A1A5D9 508 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 GTPBP10A4D1E9 387 aaKnown RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 A8MU76 341 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 TCP11X1B4DZS4 312 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 TRAFD1O14545 582 aaPredicted RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 PNMA6AP0CW24 399 aaPredicted RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 PON1P27169 355 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 TEAD1P28347 426 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 ERCC5P28715 1186 aaPredicted RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 SERPINA4P29622 427 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 ACTR1BP42025 376 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 BPIFB4P59827 614 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 ACTR1AP61163 376 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 POLR2LP62875 67 aaKnown RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 CDK3Q00526 305 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 MRPL49Q13405 166 aaKnown RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 ACOX1Q15067 660 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 CDO1Q16878 200 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 EXOC3L4Q17RC7 722 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 C15orf59Q2T9L4 293 aaPredicted RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 PARP15Q460N3 678 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 CCDC14Q49A88 953 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 NADK2Q4G0N4 442 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 SNAP47Q5SQN1 464 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 PAPD7Q5XG87 772 aaKnown RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 ISM2Q6H9L7 571 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 KLHL10Q6JEL2 608 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 GBP6Q6ZN66 633 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 STRADAQ7RTN6 431 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 LYSMD3Q7Z3D4 306 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 SRLQ86TD4 932 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 ZNF761Q86XN6 746 aaPredicted RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 UMODL1-AS1Q8N2C9 162 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 CBARPQ8N350 705 aaPredicted RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 SFRP1Q8N474 314 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 CCDC185Q8N715 623 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 SLC37A2Q8TED4 501 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 CENPIQ92674 756 aaPredicted RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 NTAN1Q96AB6 310 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 NUS1Q96E22 293 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 TCTN2Q96GX1 697 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 SLC38A3Q99624 504 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 TRIM55Q9BYV6 548 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 ZNF768Q9H5H4 540 aaKnown RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 ATP13A3Q9H7F0 1226 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 SIX2Q9NPC8 291 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 KCTD5Q9NXV2 234 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 UBA2Q9UBT2 640 aaPredicted RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 ERRFI1Q9UJM3 462 aaPredicted RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 KCND3Q9UK17 655 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 MAN1B1Q9UKM7 699 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 PLEKHM1Q9Y4G2 1056 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 PCDHGA9Q9Y5G4 932 aaKnown RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 PCDHGA6Q9Y5G7 932 aa7.77□□□□□ -1.17
NXF1-212ENST00000531872 TNRC6AQ8NDV7 1962 aaKnown RBP7.77□□□□□ -1.17
NXF1-212ENST00000531872 CDC14CA4D256 554 aa7.76□□□□□ -1.17
NXF1-212ENST00000531872 GOLGA6L3A6NEY3 463 aa7.76□□□□□ -1.17
NXF1-212ENST00000531872 C2CD4BA6NLJ0 364 aa7.76□□□□□ -1.17
NXF1-212ENST00000531872 J3KR12 359 aa7.76□□□□□ -1.17
NXF1-212ENST00000531872 INPP4BO15327 924 aa7.76□□□□□ -1.17
NXF1-212ENST00000531872 CREG1O75629 220 aa7.76□□□□□ -1.17
NXF1-212ENST00000531872 DNAJB5O75953 348 aa7.76□□□□□ -1.17
NXF1-212ENST00000531872 LSM8O95777 96 aaKnown RBP7.76□□□□□ -1.17
NXF1-212ENST00000531872 HSP90AA1P07900 732 aaKnown RBP7.76□□□□□ -1.17
NXF1-212ENST00000531872 ANKRD34CP0C6C1 535 aa7.76□□□□□ -1.17
NXF1-212ENST00000531872 ZNF28P17035 718 aa7.76□□□□□ -1.17
NXF1-212ENST00000531872 EPHB2P29323 1055 aa7.76□□□□□ -1.17
NXF1-212ENST00000531872 PTPN9P43378 593 aa7.76□□□□□ -1.17
NXF1-212ENST00000531872 NOP2P46087 812 aaKnown RBP7.76□□□□□ -1.17
NXF1-212ENST00000531872 POLD2P49005 469 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms