RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 VPS28Q9UK41 221 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 NENFQ9UMX5 172 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 PAXBP1Q9Y5B6 917 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 PCDHB14Q9Y5E9 798 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 BZW2Q9Y6E2 419 aaKnown RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 MYO9AB2RTY4 2548 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 NYNRINQ9P2P1 1898 aaKnown RBP7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 SHROOM3Q8TF72 1996 aa7.11□□□□□ -1.27
TRIM53CP-201ENST00000531490 KRTAP9-6A0A140TA67 174 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 CBFA2T2O43439 604 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 CREB3O43889 395 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 SDC3O75056 442 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 ZNF821O75541 412 aaPredicted RBP7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 ZMPSTE24O75844 475 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 ASLP04424 464 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 MYF5P13349 255 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 C6P13671 934 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 IL1R2P27930 398 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 EPHA8P29322 1005 aaPredicted RBP7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 MIPP30301 263 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 L1CAMP32004 1257 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 ACTN2P35609 894 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 RACK1P63244 317 aaKnown RBP7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 MTA1Q13330 715 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 INAVAQ3KP66 663 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 ARL13BQ3SXY8 428 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 KIAA1614Q5VZ46 1190 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 KIAA0895LQ68EN5 471 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 TXNRD3NBQ6F5E7 133 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 LEKR1Q6ZMV7 388 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 SETD3Q86TU7 594 aaPredicted RBP7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 MMAAQ8IVH4 418 aaKnown RBP7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 SH2D3CQ8N5H7 860 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 ZNF557Q8N988 423 aaPredicted RBP7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 NTAN1Q96AB6 310 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 TRIM44Q96DX7 344 aaPredicted RBP7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 CCDC74BQ96LY2 380 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 TRIM5Q9C035 493 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 KLC2Q9H0B6 622 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 RSPH9Q9H1X1 276 aaPredicted RBP7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 NEUROG2Q9H2A3 272 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 AASDHPPTQ9NRN7 309 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 VPS51Q9UID3 782 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 SARDHQ9UL12 918 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 CLCA2Q9UQC9 943 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 RELNP78509 3460 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 TRPM6Q9BX84 2022 aa7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 TDRD6O60522 2096 aaKnown RBP7.1□□□□□ -1.27
TRIM53CP-201ENST00000531490 EDDM13A0A1B0GTR0 161 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 A0A1W2PPC4 97 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 A0A1W2PR77 199 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 ILVBLA1L0T0 632 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 TARSL2A2RTX5 802 aaKnown RBP7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 ANKRD62A6NC57 917 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 SLC22A31A6NKX4 558 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 TRIM38O00635 465 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 MID1O15344 667 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 KLK10O43240 276 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 MFAP3LO75121 409 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 LRCH4O75427 683 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 ATE1O95260 518 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 MT-CO3P00414 261 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 DNTTP04053 509 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 CYP1A2P05177 515 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 TPM3P06753 285 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 C1SP09871 688 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 SRCP12931 536 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 EPHB2P29323 1055 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 SLC8A1P32418 973 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 ARF5P84085 180 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 GNA12Q03113 381 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 SULT2A1Q06520 285 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 CST6Q15828 149 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 SLC18A3Q16572 532 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 POM121L1PQ3SYA9 428 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 ATP13A4Q4VNC1 1196 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 ERMARDQ5T6L9 678 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 SARM1Q6SZW1 724 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 SPATS2Q86XZ4 545 aaKnown RBP7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 AADATQ8N5Z0 425 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 DCBLD1Q8N8Z6 715 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 TC2NQ8N9U0 490 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 ATP11CQ8NB49 1132 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 KDM1BQ8NB78 822 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 ARHGEF2Q92974 986 aaKnown RBP7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 VOPP1Q96AW1 172 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 TBC1D31Q96DN5 1066 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 IQCDQ96DY2 449 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 HIC2Q96JB3 615 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 SNRNP25Q9BV90 132 aaKnown RBP7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 NUP85Q9BW27 656 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 DHX35Q9H5Z1 703 aaKnown RBP7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 NHEJ1Q9H9Q4 299 aaPredicted RBP7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 SGK2Q9HBY8 427 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 GDF3Q9NR23 364 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 ABHD10Q9NUJ1 306 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 SPTLC3Q9NUV7 552 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 TMEM51Q9NW97 253 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 TMEM248Q9NWD8 314 aa7.09□□□□□ -1.27
TRIM53CP-201ENST00000531490 FBXL12Q9NXK8 326 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms