RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 CIDEAO60543 219 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 IGHV4-39P01824 125 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 MMP14P50281 582 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 EFNA5P52803 228 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 ICA1Q05084 483 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 ZFP69Q49AA0 526 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 FAM83BQ5T0W9 1011 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 FAM171BQ6P995 826 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 NOL8Q76FK4 1167 aaKnown RBP4.12□□□□□ -1.75
PTPRK-220ENST00000531466 FAM222BQ8WU58 562 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 RUBCNQ92622 972 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 OPRPNQ99935 248 aaPredicted RBP4.12□□□□□ -1.75
PTPRK-220ENST00000531466 EPHX3Q9H6B9 360 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 ERVMER34-1Q9H9K5 563 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 CARD8Q9Y2G2 431 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 STON1Q9Y6Q2 735 aa4.12□□□□□ -1.75
PTPRK-220ENST00000531466 IGLV5-45A0A087WSX0 123 aa4.11□□□□□ -1.75
PTPRK-220ENST00000531466 SORBS2O94875 1100 aaKnown RBP4.11□□□□□ -1.75
PTPRK-220ENST00000531466 ERVK-10P10266 1014 aa4.11□□□□□ -1.75
PTPRK-220ENST00000531466 ZNF26P17031 533 aaPredicted RBP4.11□□□□□ -1.75
PTPRK-220ENST00000531466 EEF1A1P68104 462 aaKnown RBP4.11□□□□□ -1.75
PTPRK-220ENST00000531466 GAGE5Q13069 117 aa4.11□□□□□ -1.75
PTPRK-220ENST00000531466 GAGE6Q13070 117 aa4.11□□□□□ -1.75
PTPRK-220ENST00000531466 TMEM187Q14656 261 aa4.11□□□□□ -1.75
PTPRK-220ENST00000531466 EEF1A1P5Q5VTE0 462 aa4.11□□□□□ -1.75
PTPRK-220ENST00000531466 KCTD18Q6PI47 426 aaPredicted RBP4.11□□□□□ -1.75
PTPRK-220ENST00000531466 TAAR8Q969N4 342 aa4.11□□□□□ -1.75
PTPRK-220ENST00000531466 FBXL8Q96CD0 374 aa4.11□□□□□ -1.75
PTPRK-220ENST00000531466 SCRN2Q96FV2 425 aa4.11□□□□□ -1.75
PTPRK-220ENST00000531466 ELAC2Q9BQ52 826 aaKnown RBP4.11□□□□□ -1.75
PTPRK-220ENST00000531466 C2CD2Q9Y426 696 aa4.11□□□□□ -1.75
PTPRK-220ENST00000531466 IPO5O00410 1097 aaKnown RBP4.1□□□□□ -1.75
PTPRK-220ENST00000531466 BCAT2O15382 392 aaPredicted RBP4.1□□□□□ -1.75
PTPRK-220ENST00000531466 ARHGEF9O43307 516 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 PRKNO60260 465 aaPredicted RBP4.1□□□□□ -1.75
PTPRK-220ENST00000531466 CAVIN2O95810 425 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 MMP2P08253 660 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 CD48P09326 243 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 RRM1P23921 792 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 BDKRB2P30411 391 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 AARSP49588 968 aaKnown RBP eCLIP4.1□□□□□ -1.75
PTPRK-220ENST00000531466 ZNF234Q14588 700 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 ZNF790Q6PG37 636 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 TRPT1Q86TN4 253 aaKnown RBP4.1□□□□□ -1.75
PTPRK-220ENST00000531466 FAM160B2Q86V87 743 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 TMTC1Q8IUR5 882 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 ZNF440Q8IYI8 595 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 CACNA2D3Q8IZS8 1091 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 ZNF473Q8WTR7 871 aaKnown RBP4.1□□□□□ -1.75
PTPRK-220ENST00000531466 FCAMRQ8WWV6 532 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 CCDC136Q96JN2 1154 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 TWSG1Q9GZX9 223 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 STN1Q9H668 368 aaKnown RBP4.1□□□□□ -1.75
PTPRK-220ENST00000531466 GRHPRQ9UBQ7 328 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 DERAQ9Y315 318 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 LOXL2Q9Y4K0 774 aa4.1□□□□□ -1.75
PTPRK-220ENST00000531466 MEIOCA2RUB1 952 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 PSMD14O00487 310 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 ANP32CO43423 234 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 CSTBP04080 98 aaKnown RBP4.09□□□□□ -1.75
PTPRK-220ENST00000531466 GRIK3Q13003 919 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 KRT24Q2M2I5 525 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 SLC45A4Q5BKX6 768 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 TCTE1Q5JU00 501 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 OR52I2Q8NH67 350 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 SH3KBP1Q96B97 665 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 LINGO1Q96FE5 620 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 VGLL1Q99990 258 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 CRB3Q9BUF7 120 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 MROH8Q9H579 483 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 SUFUQ9UMX1 484 aa4.09□□□□□ -1.75
PTPRK-220ENST00000531466 A0A087X002 238 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 A0A0U1RQG5 324 aaPredicted RBP4.08□□□□□ -1.76
PTPRK-220ENST00000531466 CTAGE9A4FU28 777 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 HMGB1P1B2RPK0 211 aaPredicted RBP4.08□□□□□ -1.76
PTPRK-220ENST00000531466 KRT18P05783 430 aaKnown RBP4.08□□□□□ -1.76
PTPRK-220ENST00000531466 CTAGE8P0CG41 777 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 AGAP20933 346 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 HOXC8P31273 242 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 RPL24P83731 157 aaKnown RBP4.08□□□□□ -1.76
PTPRK-220ENST00000531466 FOXO1Q12778 655 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 CTXN3Q4LDR2 81 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 SGO1Q5FBB7 561 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 OR7E24Q6IFN5 339 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 JMJD6Q6NYC1 403 aaPredicted RBP4.08□□□□□ -1.76
PTPRK-220ENST00000531466 RBMS3Q6XE24 437 aaKnown RBP4.08□□□□□ -1.76
PTPRK-220ENST00000531466 GPAT4Q86UL3 456 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 CTAGE4Q8IX94 777 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 BEST2Q8NFU1 509 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 PIGTQ969N2 578 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 SAYSD1Q9NPB0 183 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 CCDC177Q9NQR7 707 aaPredicted RBP4.08□□□□□ -1.76
PTPRK-220ENST00000531466 BABAM1Q9NWV8 329 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 DNAJC16Q9Y2G8 782 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 GDAQ9Y2T3 454 aa4.08□□□□□ -1.76
PTPRK-220ENST00000531466 A0A0G2JLW4 131 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 FAM90A7PA6NKC0 464 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 FAM90A22PA8MWA6 464 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 FAM90A12PA8MX19 464 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 FAM90A23PA8MXZ1 464 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms