RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 SIDT1Q9NXL6 827 aaKnown RBP8.23□□□□□ -1.09
CD44-232ENST00000531118 PDP2Q9P2J9 529 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 MOSPD1Q9UJG1 213 aa8.23□□□□□ -1.09
CD44-232ENST00000531118 A0A1B0GTH6 734 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 CXorf51AA0A1B0GTR3 108 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 TSPAN11A1L157 253 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 A8MU76 341 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 PPM1DO15297 605 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 DPM1O60762 260 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 KATNA1O75449 491 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 CREG1O75629 220 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 GRAP2O75791 330 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 MAP3K6O95382 1288 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 YEATS4O95619 227 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 POP4O95707 220 aaKnown RBP8.22□□□□□ -1.09
CD44-232ENST00000531118 GLI1P08151 1106 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 ZNF28P17035 718 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 XPAP23025 273 aaPredicted RBP8.22□□□□□ -1.09
CD44-232ENST00000531118 AK4P27144 223 aaPredicted RBP8.22□□□□□ -1.09
CD44-232ENST00000531118 CASP14P31944 242 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 ACVRL1P37023 503 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 PSMA6P60900 246 aaKnown RBP8.22□□□□□ -1.09
CD44-232ENST00000531118 ILF3Q12906 894 aaKnown RBP eCLIP8.22□□□□□ -1.09
CD44-232ENST00000531118 DNASE1L3Q13609 305 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 RAPGEF1Q13905 1077 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 MYLK3Q32MK0 819 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 BRMS1LQ5PSV4 323 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 ARTNQ5T4W7 220 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 SLC30A9Q6PML9 568 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 LRRC31Q6UY01 552 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 GDF7Q7Z4P5 450 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 ARHGAP22Q7Z5H3 698 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 ZNF761Q86XN6 746 aaPredicted RBP8.22□□□□□ -1.09
CD44-232ENST00000531118 DRC7Q8IY82 874 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 ZNF295-AS1Q8N0V1 137 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 PPM1KQ8N3J5 372 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 GALNT6Q8NCL4 622 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 PNPLA2Q96AD5 504 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 C19orf60Q96EN9 201 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 STAMBPL1Q96FJ0 436 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 NT5C1BQ96P26 610 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 WDR26Q9H7D7 661 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 FBXO8Q9NRD0 319 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 ITGB1BP2Q9UKP3 347 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 MAPK8IP1Q9UQF2 711 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 MTMR6Q9Y217 621 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 ZNF451Q9Y4E5 1061 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 PCDHGA6Q9Y5G7 932 aa8.22□□□□□ -1.09
CD44-232ENST00000531118 MDC1Q14676 2089 aaKnown RBP8.22□□□□□ -1.09
CD44-232ENST00000531118 HEATR9A2RTY3 570 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 ANKUB1A6NFN9 424 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 PRSS44E7EML9 344 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 POLR1CO15160 346 aaPredicted RBP8.21□□□□□ -1.1
CD44-232ENST00000531118 SLC16A3O15427 465 aaKnown RBP8.21□□□□□ -1.1
CD44-232ENST00000531118 KRT86O43790 486 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 PIGNO95427 931 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 CBX6O95503 412 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 IGSF6O95976 241 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 TFE3P19532 575 aaPredicted RBP8.21□□□□□ -1.1
CD44-232ENST00000531118 SYT1P21579 422 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 STAT1P42224 750 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 PPM1FP49593 454 aaPredicted RBP8.21□□□□□ -1.1
CD44-232ENST00000531118 LIG3P49916 1009 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 SUOXP51687 545 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 GEMIN4P57678 1058 aaKnown RBP8.21□□□□□ -1.1
CD44-232ENST00000531118 CHRNA6Q15825 494 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 RESP18Q5W5W9 173 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 OLFML1Q6UWY5 402 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 C6orf15Q6UXA7 325 aaPredicted RBP8.21□□□□□ -1.1
CD44-232ENST00000531118 LEKR1Q6ZMV7 388 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 FAM183BPQ6ZVS7 135 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 SLC47A2Q86VL8 602 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 XYLT1Q86Y38 959 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 PELI3Q8N2H9 469 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 GUF1Q8N442 669 aaKnown RBP8.21□□□□□ -1.1
CD44-232ENST00000531118 OR10G6Q8NH81 332 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 HMCESQ96FZ2 354 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 PAGE5Q96GU1 130 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 AHCYL2Q96HN2 611 aaKnown RBP8.21□□□□□ -1.1
CD44-232ENST00000531118 LGR4Q9BXB1 951 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 PCDH12Q9NPG4 1184 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 PCDHGB7Q9Y5F8 929 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 FER1L5A0AVI2 2057 aa8.21□□□□□ -1.1
CD44-232ENST00000531118 A0A1B0GTL3 188 aa8.2□□□□□ -1.1
CD44-232ENST00000531118 PIPSLA2A3N6 862 aa8.2□□□□□ -1.1
CD44-232ENST00000531118 ARGFXA6NJG6 315 aa8.2□□□□□ -1.1
CD44-232ENST00000531118 KIAA0754O94854 1291 aa8.2□□□□□ -1.1
CD44-232ENST00000531118 TMCC1O94876 653 aa8.2□□□□□ -1.1
CD44-232ENST00000531118 HOXC4P09017 264 aaPredicted RBP8.2□□□□□ -1.1
CD44-232ENST00000531118 MYCLP1P12525 358 aaPredicted RBP8.2□□□□□ -1.1
CD44-232ENST00000531118 NFKBIAP25963 317 aa8.2□□□□□ -1.1
CD44-232ENST00000531118 ETFBP38117 255 aa8.2□□□□□ -1.1
CD44-232ENST00000531118 GNPDA1P46926 289 aa8.2□□□□□ -1.1
CD44-232ENST00000531118 FASLGP48023 281 aa8.2□□□□□ -1.1
CD44-232ENST00000531118 CXCR3P49682 368 aa8.2□□□□□ -1.1
CD44-232ENST00000531118 SULT1E1P49888 294 aa8.2□□□□□ -1.1
CD44-232ENST00000531118 RALGDSQ12967 914 aa8.2□□□□□ -1.1
CD44-232ENST00000531118 TESK1Q15569 626 aa8.2□□□□□ -1.1
CD44-232ENST00000531118 ZRSR2Q15696 482 aaKnown RBP8.2□□□□□ -1.1
CD44-232ENST00000531118 UGT8Q16880 541 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms