RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 AAGABQ6PD74 315 aa8.48□□□□□ -1.05
CTNND1-227ENST00000530748 VSTM1Q6UX27 236 aa8.48□□□□□ -1.05
CTNND1-227ENST00000530748 CHST9Q7L1S5 443 aa8.48□□□□□ -1.05
CTNND1-227ENST00000530748 CHPFQ8IZ52 775 aa8.48□□□□□ -1.05
CTNND1-227ENST00000530748 TSPAN14Q8NG11 270 aa8.48□□□□□ -1.05
CTNND1-227ENST00000530748 PLD4Q96BZ4 506 aa8.48□□□□□ -1.05
CTNND1-227ENST00000530748 COPS8Q99627 209 aa8.48□□□□□ -1.05
CTNND1-227ENST00000530748 HOPXQ9BPY8 73 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-227ENST00000530748 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.48□□□□□ -1.05
CTNND1-227ENST00000530748 TBC1D14Q9P2M4 693 aa8.48□□□□□ -1.05
CTNND1-227ENST00000530748 MAFBQ9Y5Q3 323 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-227ENST00000530748 MSI1O43347 362 aaKnown RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 PSMD4P55036 377 aaKnown RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 CDH4P55283 916 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 JAM2P57087 298 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 MBTD1Q05BQ5 628 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 FNBP1LQ5T0N5 605 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 NAIF1Q69YI7 327 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 FOXR1Q6PIV2 292 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 SLC26A9Q7LBE3 791 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 PHYKPLQ8IUZ5 450 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 KBTBD8Q8NFY9 601 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 RCN3Q96D15 328 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 EXOC2Q96KP1 924 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 SNX27Q96L92 541 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 GAS2L1Q99501 681 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 ZNF490Q9ULM2 529 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 SLIT2O94813 1529 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 A0A1W2PQ67 120 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 SUV39H1O43463 412 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 MFSD11O43934 449 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 PCCBP05166 539 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 COL6A2P12110 1019 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 ITGAXP20702 1163 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 BMP6P22004 513 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 PSMD8P48556 350 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 ENPEPQ07075 957 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 NOGQ13253 232 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 CERCAMQ5T4B2 595 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 PWWP2AQ96N64 755 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 CSPG4P5Q96PW8 444 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 TEFMQ96QE5 360 aaKnown RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 AARSD1Q9BTE6 412 aaKnown RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 HIPK3Q9H422 1215 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 C3orf14Q9HBI5 128 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 PNPOQ9NVS9 261 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 PCDHA2Q9Y5H9 948 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 ATXN2Q99700 1313 aaKnown RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 OR10H3O60404 316 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 PPP1R11O60927 126 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 LRATO95237 230 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 BPGMP07738 259 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 HNRNPLP14866 589 aaKnown RBP eCLIP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 TACR2P21452 398 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 KELP23276 732 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 SP100P23497 879 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 ICAM3P32942 547 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 SLC26A3P40879 764 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 XIAPP98170 497 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 LGALS3BPQ08380 585 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 ELP6Q0PNE2 266 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 SCIMPQ6UWF3 145 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 ZYG11AQ6WRX3 759 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 CEP68Q76N32 757 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 GET4Q7L5D6 327 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 FUKQ8N0W3 1084 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 CFAP52Q8N1V2 620 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 NAT16Q8N8M0 369 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 FAM98AQ8NCA5 519 aaKnown RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 CLIP3Q96DZ5 547 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 KREMEN1Q96MU8 473 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 KLHL5Q96PQ7 755 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 KIFC1Q9BW19 673 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 NUAK2Q9H093 628 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 PNPLA3Q9NST1 481 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 PTGFRNQ9P2B2 879 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 SUCOQ9UBS9 1254 aaKnown RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 SAMD4AQ9UPU9 718 aaKnown RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 ASF1AQ9Y294 204 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 ZFP37Q9Y6Q3 630 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 SNPHO15079 494 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 PIRTP0C851 137 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 SNHG28P0DPA3 235 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 BUD31P41223 144 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 IDH2P48735 452 aaKnown RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 SLC5A3P53794 718 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 FAM110CQ1W6H9 321 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 PYDC2Q56P42 97 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 RHBDF2Q6PJF5 856 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 TMC5Q6UXY8 1006 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 RPTNQ6XPR3 784 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 TNS4Q8IZW8 715 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 CLP1Q92989 425 aaKnown RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 MUC13Q9H3R2 512 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 RHOJQ9H4E5 214 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 EPB41L1Q9H4G0 881 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 NOL6Q9H6R4 1146 aaKnown RBP8.47□□□□□ -1.05
CTNND1-227ENST00000530748 ERGIC3Q9Y282 383 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 KCNE2Q9Y6J6 123 aa8.47□□□□□ -1.05
CTNND1-227ENST00000530748 SYN3O14994 580 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms