RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 TBC1D3KA0A087X1G2 549 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 TBC1D3FA6NER0 549 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-225ENST00000530094 TMEM191CA6NGB0 347 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 TBC1D3LB9A6J9 549 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 SNAI1O95863 264 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-225ENST00000530094 MT-CO1P00395 513 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 TBC1D3HP0C7X1 549 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 RPL17P18621 184 aaKnown RBP8.46□□□□□ -1.06
CTNND1-225ENST00000530094 TFEBP19484 476 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 MC4RP32245 332 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 CDH5P33151 784 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-225ENST00000530094 OTUD3Q5T2D3 398 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-225ENST00000530094 TBC1D3GQ6DHY5 549 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 FAAH2Q6GMR7 532 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 TBC1D3CQ6IPX1 549 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 PLEKHA7Q6IQ23 1121 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 KLHL24Q6TFL4 600 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 GPR180Q86V85 440 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 TBC1D3Q8IZP1 549 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-225ENST00000530094 AENQ8WTP8 325 aaKnown RBP8.46□□□□□ -1.06
CTNND1-225ENST00000530094 MIEF2Q96C03 454 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 FAXDC2Q96IV6 333 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 TLR10Q9BXR5 811 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 C8orf4Q9NR00 106 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 RAB21Q9UL25 225 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 ASF1AQ9Y294 204 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 hCG_1818297A0A087WSY0 165 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 LRRC10BA6NIK2 292 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 MCIDASD6RGH6 385 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 NEDD8-MDP1E9PL57 170 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 CAPN1P07384 714 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 TGFBR2P37173 567 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 CXCR3P49682 368 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 PRKAG1P54619 331 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 YBEYP58557 167 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-225ENST00000530094 NOMO3P69849 1222 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 SLC44A4Q53GD3 710 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 SLC25A24Q6NUK1 477 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 CERS6Q6ZMG9 384 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 TEX47Q8TBZ9 253 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 PPCDCQ96CD2 204 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 SPAG4Q9NPE6 437 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 CORO1CQ9ULV4 474 aaPredicted RBP8.46□□□□□ -1.06
CTNND1-225ENST00000530094 SH3GLB1Q9Y371 365 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 RPP40O75818 363 aaKnown RBP8.46□□□□□ -1.06
CTNND1-225ENST00000530094 SMNDC1O75940 238 aaKnown RBP eCLIP8.46□□□□□ -1.06
CTNND1-225ENST00000530094 ATP6V1G2O95670 118 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 COL6A2P12110 1019 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 RCVRNP35243 200 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 MAPKAPK2P49137 400 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 ATP12AP54707 1039 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 DRG2P55039 364 aaKnown RBP8.46□□□□□ -1.06
CTNND1-225ENST00000530094 GJD3Q8N144 294 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 METTL21AQ8WXB1 218 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.46□□□□□ -1.063e-6■□□□□ 9.8
CTNND1-225ENST00000530094 EFR3BQ9Y2G0 817 aa8.46□□□□□ -1.06
CTNND1-225ENST00000530094 TRIM38O00635 465 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 RHOQP17081 205 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 RPL22P35268 128 aaKnown RBP8.45□□□□□ -1.06
CTNND1-225ENST00000530094 ASMTP46597 345 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 GABRB2P47870 512 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 ABRQ12979 859 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 ATXN7L2Q5T6C5 722 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-225ENST00000530094 TAPT1Q6NXT6 567 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 PRRG4Q9BZD6 226 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 TM6SF2Q9BZW4 377 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 CHST7Q9NS84 486 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 C3orf18Q9UK00 162 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 TRIM43BA6NCK2 446 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 TRAFD1O14545 582 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-225ENST00000530094 DCXO43602 365 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 EOMESO95936 686 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 PTPN2P17706 415 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 CDH4P55283 916 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 CACNG1Q06432 222 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 INAVAQ3KP66 663 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 LRRC55Q6ZSA7 311 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 OFCC1Q8IZS5 231 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 PIK3C3Q8NEB9 887 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 TRIM63Q969Q1 353 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 FEM1CQ96JP0 617 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 GPR88Q9GZN0 384 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 PCBD2Q9H0N5 130 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 ADAMTS3O15072 1205 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 CMPK1P30085 196 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 SPAM1P38567 509 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 GRIA4P48058 902 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 ERVK-21P61565 698 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 TRIM32Q13049 653 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 POM121L1PQ3SYA9 428 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 TCHHL1Q5QJ38 904 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-225ENST00000530094 PPP1R26Q5T8A7 1209 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-225ENST00000530094 ERICH5Q6P6B1 374 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 DNAJC14Q6Y2X3 702 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-225ENST00000530094 UBE2R2Q712K3 238 aaPredicted RBP8.45□□□□□ -1.06
CTNND1-225ENST00000530094 OAFQ86UD1 273 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 MCEMP1Q8IX19 187 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 ZCCHC7Q8N3Z6 543 aaKnown RBP8.45□□□□□ -1.06
CTNND1-225ENST00000530094 OR4A15Q8NGL6 344 aa8.45□□□□□ -1.06
CTNND1-225ENST00000530094 PHF10Q8WUB8 498 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms