RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 CELF6Q96J87 481 aaKnown RBP10.56□□□□□ -0.72
CPSF1-203ENST00000527916 ZNF599Q96NL3 588 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 TAAR9Q96RI9 348 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 ZWILCHQ9H900 591 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 MYO1AQ9UBC5 1043 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 GGT7Q9UJ14 662 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 ITM2BQ9Y287 266 aa10.56□□□□□ -0.72
CPSF1-203ENST00000527916 LUC7L2Q9Y383 392 aaKnown RBP10.56□□□□□ -0.72
CPSF1-203ENST00000527916 ARHGEF17Q96PE2 2063 aaPredicted RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 H3BRJ5 948 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 INSIG1O15503 277 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 NUDT21O43809 227 aaKnown RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 MMP20O60882 483 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 AGFG2O95081 481 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 CPNE6O95741 557 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 TNFP01375 233 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 CYP1A2P05177 515 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 XPAP23025 273 aaPredicted RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 IL1R2P27930 398 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 HNRNPH3P31942 346 aaKnown RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 ARL4AP40617 200 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 CD97P48960 835 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 RENBPP51606 427 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 SRP54P61011 504 aaKnown RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 POLR2LP62875 67 aaKnown RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 KLRB1Q12918 225 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 SEPT6Q14141 434 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 C16orf72Q14CZ0 275 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 LRRC14Q15048 493 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 CLPPQ16740 277 aaPredicted RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 SKOR2Q2VWA4 1001 aaPredicted RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 C14orf28Q4W4Y0 310 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 LACTB2Q53H82 288 aaPredicted RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 PPP6R3Q5H9R7 873 aaPredicted RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 ENPP7Q6UWV6 458 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 POLNQ7Z5Q5 900 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 SRLQ86TD4 932 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 CACNA2D3Q8IZS8 1091 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 TP53I13Q8NBR0 393 aaPredicted RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 TSEN2Q8NCE0 465 aaKnown RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 FAM46DQ8NEK8 389 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 TEKT4Q8WW24 435 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 APOBEC4Q8WW27 367 aaKnown RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 SPOCK2Q92563 424 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 KIAA1143Q96AT1 154 aaPredicted RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 ECHDC3Q96DC8 303 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 PSKH2Q96QS6 385 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 RBM15Q96T37 977 aaKnown RBP eCLIP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 EFHD1Q9BUP0 239 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 THAP2Q9H0W7 228 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 SEMA6CQ9H3T2 930 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 ATP13A3Q9H7F0 1226 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 MBNL1Q9NR56 388 aaKnown RBP10.55□□□□□ -0.72
CPSF1-203ENST00000527916 LRIT1Q9P2V4 623 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 KLQ9UEF7 1012 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 IP6K2Q9UHH9 426 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 PCDHGA3Q9Y5H0 932 aa10.55□□□□□ -0.72
CPSF1-203ENST00000527916 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.55□□□□□ -0.725e-8■■■□□ 15
CPSF1-203ENST00000527916 C2CD3Q4AC94 2353 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 ESPL1Q14674 2120 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 A0A087X0T9 212 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 A0A1W2PQ67 120 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 MYO1FO00160 1098 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 BUB1BO60566 1050 aaPredicted RBP10.54□□□□□ -0.72
CPSF1-203ENST00000527916 PIGNO95427 931 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 GYPCP04921 128 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 FAM228BP0C875 321 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 RARAP10276 462 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 CCL4P13236 92 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 SERPINA4P29622 427 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 UGT1A3P35503 534 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 NFATC4Q14934 902 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 IRF4Q15306 451 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 HIST2H2BCQ6DN03 193 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 ERAP2Q6P179 960 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 ALKBH5Q6P6C2 394 aaKnown RBP10.54□□□□□ -0.72
CPSF1-203ENST00000527916 OGFOD3Q6PK18 319 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 TAF8Q7Z7C8 310 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 LRRC49Q8IUZ0 686 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 NPWQ8N729 165 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 NETO2Q8NC67 525 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 FAM71BQ8TC56 605 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 CPLX3Q8WVH0 158 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 ABHD17AQ96GS6 310 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 SLC45A3Q96JT2 553 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 EXOC2Q96KP1 924 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 WDR92Q96MX6 357 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 ASPSCR1Q9BZE9 553 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 SP110Q9HB58 689 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 PCDH12Q9NPG4 1184 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 RCOR3Q9P2K3 495 aaPredicted RBP10.54□□□□□ -0.72
CPSF1-203ENST00000527916 LCMT1Q9UIC8 334 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 NENFQ9UMX5 172 aa10.54□□□□□ -0.72
CPSF1-203ENST00000527916 SPENQ96T58 3664 aaKnown RBP10.54□□□□□ -0.72
CPSF1-203ENST00000527916 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.53□□□□□ -0.72
CPSF1-203ENST00000527916 PRR19A6NJB7 356 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 DFFAO00273 331 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 TRAFD1O14545 582 aaPredicted RBP10.53□□□□□ -0.72
CPSF1-203ENST00000527916 MTSS1O43312 755 aa10.53□□□□□ -0.72
CPSF1-203ENST00000527916 VPS4BO75351 444 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms