RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 MC4RP32245 332 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 ABCG1P45844 678 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 RAB10P61026 200 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 XIAPP98170 497 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 SMAD4Q13485 552 aaKnown RBP20.48■□□□□ 0.87
SMCO4-203ENST00000526869 ZNF234Q14588 700 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 ZNF805Q5CZA5 627 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 ZDHHC20Q5W0Z9 365 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 CRTC1Q6UUV9 634 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 CDHR3Q6ZTQ4 885 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 CMC1Q7Z7K0 106 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 GRIN3AQ8TCU5 1115 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 EID2BQ96D98 161 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 CHFRQ96EP1 664 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 FAM111AQ96PZ2 611 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 RPP25Q9BUL9 199 aaKnown RBP20.48■□□□□ 0.87
SMCO4-203ENST00000526869 BRD9Q9H8M2 597 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 TRPV5Q9NQA5 729 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 THAP10Q9P2Z0 257 aaPredicted RBP20.48■□□□□ 0.87
SMCO4-203ENST00000526869 APPL1Q9UKG1 709 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 TLK1Q9UKI8 766 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 CDH23Q9H251 3354 aa20.48■□□□□ 0.87
SMCO4-203ENST00000526869 A0A087X1B8 175 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 NPIPB15A6NHN6 443 aaPredicted RBP20.47■□□□□ 0.87
SMCO4-203ENST00000526869 UPK3BL1B0FP48 263 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 UPK3BL2E5RIL1 263 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 LEFTY1O75610 366 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 SLC4A1P02730 911 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 C2P06681 752 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 F7P08709 466 aaPredicted RBP20.47■□□□□ 0.87
SMCO4-203ENST00000526869 CYP2A6P11509 494 aaPredicted RBP20.47■□□□□ 0.87
SMCO4-203ENST00000526869 STMN1P16949 149 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 ZNF30P17039 623 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 PMLP29590 882 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 TTPAP49638 278 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 CACNG1Q06432 222 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 PEX6Q13608 980 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 SEMA3AQ14563 771 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 PTPRRQ15256 657 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 ARSIQ5FYB1 569 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 FAM45BPQ6NSW5 357 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 SLC41A1Q8IVJ1 513 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 ACVR1CQ8NER5 493 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 TMIEQ8NEW7 156 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 FAM45AQ8TCE6 357 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 CSGALNACT1Q8TDX6 532 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 OR8D1Q8WZ84 308 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.47■□□□□ 0.878e-8■■■■■ 61.9
SMCO4-203ENST00000526869 ELMO2Q96JJ3 720 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 PAIP2Q9BPZ3 127 aaKnown RBP20.47■□□□□ 0.87
SMCO4-203ENST00000526869 CAB39LQ9H9S4 337 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 STARD13Q9Y3M8 1113 aa20.47■□□□□ 0.87
SMCO4-203ENST00000526869 GRXCR2A6NFK2 248 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 BIRC5O15392 142 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 CLDN7O95471 211 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 FAM107AO95990 144 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 CTSLP07711 333 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 HNRNPLP14866 589 aaKnown RBP eCLIP20.46■□□□□ 0.87
SMCO4-203ENST00000526869 VIPR1P32241 457 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 TNFRSF4P43489 277 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 SEC24CP53992 1094 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 SLC12A2P55011 1212 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 TAS2R39P59534 338 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 ELAVL3Q14576 367 aaKnown RBP20.46■□□□□ 0.87
SMCO4-203ENST00000526869 CCDC153Q494R4 210 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 ZNF789Q5FWF6 425 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 PPM1JQ5JR12 505 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 C9orf64Q5T6V5 341 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 SERPINA13PQ6UXR4 307 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 CERS6Q6ZMG9 384 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 GPATCH11Q8N954 259 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 TTC8Q8TAM2 541 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 OMDQ99983 421 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 NSRP1Q9H0G5 558 aaKnown RBP20.46■□□□□ 0.87
SMCO4-203ENST00000526869 POPDC3Q9HBV1 291 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 SUN2Q9UH99 717 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 SLC30A1Q9Y6M5 507 aa20.46■□□□□ 0.87
SMCO4-203ENST00000526869 PLIN3O60664 434 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 APOA4P06727 396 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 SLC35E2BP0CK96 405 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 TAC1P20366 129 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 DRD4P21917 467 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 PPARGP37231 505 aaPredicted RBP20.45■□□□□ 0.86
SMCO4-203ENST00000526869 SPAM1P38567 509 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 SLC26A3P40879 764 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 SERPINB4P48594 390 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 SUOXP51687 545 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 ENPP2Q13822 863 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 HECTD2Q5U5R9 776 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 LYPLAL1Q5VWZ2 237 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 NAIF1Q69YI7 327 aaPredicted RBP20.45■□□□□ 0.86
SMCO4-203ENST00000526869 RAPH1Q70E73 1250 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 DSG4Q86SJ6 1040 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 TRIM42Q8IWZ5 723 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 STK40Q8N2I9 435 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 RAB3IL1Q8TBN0 382 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 BCAS4Q8TDM0 211 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 LPGAT1Q92604 370 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 TSNARE1Q96NA8 513 aa20.45■□□□□ 0.86
SMCO4-203ENST00000526869 CCT8L2Q96SF2 557 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms