RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 RING1Q06587 406 aa20.37■□□□□ 0.85
SMIM3-201ENST00000526627 C6orf10Q5SRN2 563 aa20.37■□□□□ 0.85
SMIM3-201ENST00000526627 FAM171A1Q5VUB5 890 aa20.37■□□□□ 0.85
SMIM3-201ENST00000526627 ALG1LQ6GMV1 187 aa20.37■□□□□ 0.85
SMIM3-201ENST00000526627 RSPO2Q6UXX9 243 aaPredicted RBP20.37■□□□□ 0.85
SMIM3-201ENST00000526627 CLYBLQ8N0X4 340 aa20.37■□□□□ 0.85
SMIM3-201ENST00000526627 SLCO4A1Q96BD0 722 aa20.37■□□□□ 0.85
SMIM3-201ENST00000526627 ATOH8Q96SQ7 321 aa20.37■□□□□ 0.85
SMIM3-201ENST00000526627 AARSD1Q9BTE6 412 aaKnown RBP20.37■□□□□ 0.85
SMIM3-201ENST00000526627 AKTIPQ9H8T0 292 aa20.37■□□□□ 0.85
SMIM3-201ENST00000526627 SPAG4Q9NPE6 437 aa20.37■□□□□ 0.85
SMIM3-201ENST00000526627 MRPL40Q9NQ50 206 aaKnown RBP20.37■□□□□ 0.85
SMIM3-201ENST00000526627 PTGDR2Q9Y5Y4 395 aa20.37■□□□□ 0.85
SMIM3-201ENST00000526627 A0A0D9SEW6 157 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 RTN3O95197 1032 aaPredicted RBP20.36■□□□□ 0.85
SMIM3-201ENST00000526627 FGF4P08620 206 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 TACR2P21452 398 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 HOXD9P28356 352 aaPredicted RBP20.36■□□□□ 0.85
SMIM3-201ENST00000526627 FOXA1P55317 472 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 ARPP19P56211 112 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 RHDQ02161 417 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 TRAP1Q12931 704 aaKnown RBP20.36■□□□□ 0.85
SMIM3-201ENST00000526627 ZNF235Q14590 738 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 TYSND1Q2T9J0 566 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 MRNIPQ6NTE8 343 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 LAYNQ6UX15 382 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 MFN1Q8IWA4 741 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 CFAP52Q8N1V2 620 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 RYBPQ8N488 228 aaPredicted RBP20.36■□□□□ 0.85
SMIM3-201ENST00000526627 OR4L1Q8NH43 312 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 ZIC5Q96T25 663 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 Q9H521 79 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 POPDC3Q9HBV1 291 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 EPS15L1Q9UBC2 864 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 MTMR11A4FU01 709 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 ZNF26P17031 533 aaPredicted RBP20.36■□□□□ 0.85
SMIM3-201ENST00000526627 OGNP20774 298 aaKnown RBP20.36■□□□□ 0.85
SMIM3-201ENST00000526627 MGAT5BQ3V5L5 792 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 SETMARQ53H47 684 aaPredicted RBP20.36■□□□□ 0.85
SMIM3-201ENST00000526627 C6orf52Q5T4I8 152 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 RETREG3Q86VR2 466 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 PHYKPLQ8IUZ5 450 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 GALNT4Q8N4A0 578 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 NSUN5Q96P11 429 aaKnown RBP20.36■□□□□ 0.85
SMIM3-201ENST00000526627 CATSPERZQ9NTU4 200 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 CROTQ9UKG9 612 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 RIMKLBQ9ULI2 386 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 MED16Q9Y2X0 877 aa20.36■□□□□ 0.85
SMIM3-201ENST00000526627 TCRBV3S1A0A5B6 114 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 ZDHHC11BP0C7U3 371 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 PRKAR2AP13861 404 aaKnown RBP20.35■□□□□ 0.85
SMIM3-201ENST00000526627 HOXB8P17481 243 aaPredicted RBP20.35■□□□□ 0.85
SMIM3-201ENST00000526627 KCNQ1P51787 676 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 STC1P52823 247 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 MYBPC1Q00872 1141 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 SATL1Q86VE3 508 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 PCSK9Q8NBP7 692 aaKnown RBP20.35■□□□□ 0.85
SMIM3-201ENST00000526627 RHEBL1Q8TAI7 183 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 DUS3LQ96G46 650 aaKnown RBP20.35■□□□□ 0.85
SMIM3-201ENST00000526627 SLC39A3Q9BRY0 314 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 GMPR2Q9P2T1 348 aaKnown RBP20.35■□□□□ 0.85
SMIM3-201ENST00000526627 GIMAP2Q9UG22 337 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 IKZF3Q9UKT9 509 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 AP4S1Q9Y587 144 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 ANKRD36A6QL64 1941 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 MOXD2PA6NHM9 499 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 OR6C75A6NL08 312 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 CA12O43570 354 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 LAMB3Q13751 1172 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 ISLR2Q6UXK2 745 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 CDKN2AIPNLQ96HQ2 116 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 FAM193BQ96PV7 902 aaPredicted RBP20.35■□□□□ 0.85
SMIM3-201ENST00000526627 MGME1Q9BQP7 344 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 SLC2A11Q9BYW1 496 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.35■□□□□ 0.85
SMIM3-201ENST00000526627 TUBB1Q9H4B7 451 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 TFB2MQ9H5Q4 396 aaKnown RBP20.35■□□□□ 0.85
SMIM3-201ENST00000526627 CNOT11Q9UKZ1 510 aaKnown RBP20.35■□□□□ 0.85
SMIM3-201ENST00000526627 SPO11Q9Y5K1 396 aa20.35■□□□□ 0.85
SMIM3-201ENST00000526627 THSD7BQ9C0I4 1608 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 TMEM88BA6NKF7 163 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 PGM3O95394 542 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 NDST3O95803 873 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 ELNP15502 786 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 SLC6A4P31645 630 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 ILF2Q12905 390 aaKnown RBP20.34■□□□□ 0.85
SMIM3-201ENST00000526627 PFKFB4Q16877 469 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 C5orf22Q49AR2 442 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 KANK2Q63ZY3 851 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 RNF19BQ6ZMZ0 732 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 LGI2Q8N0V4 545 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 SPATA17Q96L03 361 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 CNBD2Q96M20 576 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 ZNF599Q96NL3 588 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 SEPT5Q99719 369 aaPredicted RBP20.34■□□□□ 0.85
SMIM3-201ENST00000526627 TRIM4Q9C037 500 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 MID1IP1Q9NPA3 183 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 AK5Q9Y6K8 562 aa20.34■□□□□ 0.85
SMIM3-201ENST00000526627 PIP5K1BO14986 540 aa20.33■□□□□ 0.85
SMIM3-201ENST00000526627 SRP72O76094 671 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms