RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 ATG14Q6ZNE5 492 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 RFX8Q6ZV50 586 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 TECPR1Q7Z6L1 1165 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 ZNF761Q86XN6 746 aaPredicted RBP14.26□□□□□ -0.13
CPSF1-201ENST00000526271 CLEC18CQ8NCF0 446 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 FNIP1Q8TF40 1166 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 TMEM159Q96B96 161 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 DTD2Q96FN9 168 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 SCARF2Q96GP6 870 aaPredicted RBP14.26□□□□□ -0.13
CPSF1-201ENST00000526271 PSKH2Q96QS6 385 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 AGAP2Q99490 1192 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 B3GNT4Q9C0J1 378 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 DHX35Q9H5Z1 703 aaKnown RBP14.26□□□□□ -0.13
CPSF1-201ENST00000526271 CWC15Q9P013 229 aaKnown RBP14.26□□□□□ -0.13
CPSF1-201ENST00000526271 PCSK1NQ9UHG2 260 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 SLC17A4Q9Y2C5 497 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 PCDHGA3Q9Y5H0 932 aa14.26□□□□□ -0.13
CPSF1-201ENST00000526271 SYCE3A1L190 88 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 DUX1O43812 170 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 IL1R2P27930 398 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 ALDH4A1P30038 563 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 MIPP30301 263 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 ADCY8P40145 1251 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 GNPDA1P46926 289 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 BCL2L1Q07817 233 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 IL10RBQ08334 325 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 NCAPHQ15003 741 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 TXNRD3NBQ6F5E7 133 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 ACAD10Q6JQN1 1059 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 SLC30A9Q6PML9 568 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 Q6ZVL8 140 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 PIM3Q86V86 326 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 PTRH1Q86Y79 214 aaKnown RBP14.25□□□□□ -0.13
CPSF1-201ENST00000526271 ATL2Q8NHH9 583 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 NUS1Q96E22 293 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 CINPQ9BW66 212 aaPredicted RBP14.25□□□□□ -0.13
CPSF1-201ENST00000526271 SLC25A18Q9H1K4 315 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 EPN3Q9H201 632 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 NOD2Q9HC29 1040 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 TRNAU1APQ9NX07 287 aaKnown RBP14.25□□□□□ -0.13
CPSF1-201ENST00000526271 LIMA1Q9UHB6 759 aaKnown RBP14.25□□□□□ -0.13
CPSF1-201ENST00000526271 MOSPD1Q9UJG1 213 aa14.25□□□□□ -0.13
CPSF1-201ENST00000526271 HEMK1Q9Y5R4 338 aaPredicted RBP14.25□□□□□ -0.13
CPSF1-201ENST00000526271 ZNF106Q9H2Y7 1883 aaKnown RBP14.25□□□□□ -0.13
CPSF1-201ENST00000526271 TMEM191CA6NGB0 347 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 ARHGAP42A6NI28 874 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 LGALS16A8MUM7 142 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 DFFAO00273 331 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 CD82P27701 267 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 VIPR1P32241 457 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 HTR7P34969 479 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 MAXP61244 160 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 TYRO3Q06418 890 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 SQSTM1Q13501 440 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 TIPARPQ7Z3E1 657 aaKnown RBP14.24□□□□□ -0.13
CPSF1-201ENST00000526271 TRIM74Q86UV6 250 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 PIH1D2Q8WWB5 315 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 ART4Q93070 314 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 TAAR9Q96RI9 348 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 ERGIC2Q96RQ1 377 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 MCCC1Q96RQ3 725 aaPredicted RBP14.24□□□□□ -0.13
CPSF1-201ENST00000526271 ARHGAP9Q9BRR9 750 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 ANO10Q9NW15 660 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 PDP2Q9P2J9 529 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 SPTBN1Q01082 2364 aaKnown RBP14.24□□□□□ -0.13
CPSF1-201ENST00000526271 ICE1Q9Y2F5 2266 aa14.24□□□□□ -0.13
CPSF1-201ENST00000526271 HGSO14964 777 aaPredicted RBP14.23□□□□□ -0.13
CPSF1-201ENST00000526271 NKX2-8O15522 239 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 LRCH4O75427 683 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 PDHA1P08559 390 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 PSMA2P25787 234 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 POLE2P56282 527 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 AP1S1P61966 158 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 LBRQ14739 615 aaKnown RBP14.23□□□□□ -0.13
CPSF1-201ENST00000526271 IGFBP7Q16270 282 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 STX1AQ16623 288 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 CFAP58Q5T655 872 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 ERMARDQ5T6L9 678 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 DENND2CQ68D51 928 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 WDR24Q96S15 920 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 MGME1Q9BQP7 344 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 SP110Q9HB58 689 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 SEPT11Q9NVA2 429 aaKnown RBP14.23□□□□□ -0.13
CPSF1-201ENST00000526271 SEPT10Q9P0V9 454 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 DACH1Q9UI36 760 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 CD84Q9UIB8 345 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 TMEM98Q9Y2Y6 226 aa14.23□□□□□ -0.13
CPSF1-201ENST00000526271 LRRC10BA6NIK2 292 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 TMCO5BA8MYB1 307 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 STMND1H3BQB6 276 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 FZD6O60353 706 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 MAFKO60675 156 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 PPFIA2O75334 1257 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 IVLP07476 585 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 CTPS1P17812 591 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 AMPD1P23109 780 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 KELP23276 732 aa14.22□□□□□ -0.13
CPSF1-201ENST00000526271 RFTN1Q14699 578 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-201ENST00000526271 PPP6R3Q5H9R7 873 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-201ENST00000526271 FAM182AQ5T1J6 154 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms