RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 SMC3Q9UQE7 1217 aa3.09□□□□□ -1.91
TRAPPC4-207ENST00000526141 SSX2IPQ9Y2D8 614 aa3.09□□□□□ -1.91
TRAPPC4-207ENST00000526141 WBP11Q9Y2W2 641 aaKnown RBP3.09□□□□□ -1.91
TRAPPC4-207ENST00000526141 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.09□□□□□ -1.91
TRAPPC4-207ENST00000526141 CMAHPQ9Y471 501 aa3.09□□□□□ -1.91
TRAPPC4-207ENST00000526141 LNP1A1A4G5 178 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 TMEM200CA6NKL6 621 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 C17orf100A8MU93 164 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 PRR5-ARHGAP8B1AHC4 643 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SNAP23O00161 211 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 CASQ2O14958 399 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 CLIC2O15247 247 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SPRY1O43609 319 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 TRUB2O95900 331 aaKnown RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 FAM58BPP0C7Q3 252 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 PDGFRAP16234 1089 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 ADRA2CP18825 462 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 MATN1P21941 496 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 KELP23276 732 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 MYF6P23409 242 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 ANXA11P50995 505 aaKnown RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 GALCP54803 685 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 ADARP55265 1226 aaKnown RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SH3BGRP55822 239 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 NME5P56597 212 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 ST8SIA6P61647 398 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 BLOC1S1P78537 153 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 CXCL9Q07325 125 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 IFT88Q13099 833 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 BMPR2Q13873 1038 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 KCNC3Q14003 757 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 GAMTQ14353 236 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 RNPS1Q15287 305 aaKnown RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SHROOM1Q2M3G4 852 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 CCDC40Q4G0X9 1142 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 ZNF789Q5FWF6 425 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 C6orf136Q5SQH8 315 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 CCDC183Q5T5S1 534 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SERTAD4-AS1Q5TG53 156 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 CES4AQ5XG92 561 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 FAM91A1Q658Y4 838 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 MOXD1Q6UVY6 613 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 CLEC17AQ6ZS10 378 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 RBM43Q6ZSC3 357 aaKnown RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 RUFY3Q7L099 469 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 KCTD9Q7L273 389 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 OTUD6AQ7L8S5 288 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 CACNA2D4Q7Z3S7 1137 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 TMPRSS9Q7Z410 1059 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SPATA21Q7Z572 469 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 AACSQ86V21 672 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 ARHGEF19Q8IW93 802 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 MFN1Q8IWA4 741 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 HACE1Q8IYU2 909 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 CLYBLQ8N0X4 340 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 FBXW8Q8N3Y1 598 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 Q8NA96 180 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 RNF169Q8NCN4 708 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 NSUN7Q8NE18 718 aaKnown RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 MAFAQ8NHW3 353 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SLC5A11Q8WWX8 675 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SMG7Q92540 1137 aaKnown RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SLC9A6Q92581 669 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 ZKSCAN4Q969J2 545 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 MOAP1Q96BY2 351 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 ALG14Q96F25 216 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 WDYHV1Q96HA8 205 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 HES6Q96HZ4 224 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 RMDN2Q96LZ7 410 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 DCLRE1CQ96SD1 692 aaKnown RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 PNKPQ96T60 521 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 PARK7Q99497 189 aaKnown RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 PIMREGQ9BSJ6 248 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 IFIH1Q9BYX4 1025 aaKnown RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 EPC1Q9H2F5 836 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 MMP27Q9H306 513 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 NCOR1P1Q9H4R4 102 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 ANKZF1Q9H8Y5 726 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 TUFT1Q9NNX1 390 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 PRMT8Q9NR22 394 aaPredicted RBP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SERINC1Q9NRX5 453 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SLC6A13Q9NSD5 602 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 OLAHQ9NV23 265 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 BABAM1Q9NWV8 329 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 PLK2Q9NYY3 685 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 COX16Q9P0S2 106 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 CTTNBP2NLQ9P2B4 639 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SLC25A13Q9UJS0 675 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SERTAD3Q9UJW9 196 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 CLCA3PQ9Y6N3 262 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SPATA31A3Q5VYP0 1347 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 SALL3Q9BXA9 1300 aa3.08□□□□□ -1.92
TRAPPC4-207ENST00000526141 A0A1W2PR77 199 aa3.07□□□□□ -1.92
TRAPPC4-207ENST00000526141 GAGE12BA1L429 117 aa3.07□□□□□ -1.92
TRAPPC4-207ENST00000526141 SMIM30A4D0T7 59 aa3.07□□□□□ -1.92
TRAPPC4-207ENST00000526141 CTAGE9A4FU28 777 aa3.07□□□□□ -1.92
TRAPPC4-207ENST00000526141 GAGE12HA6NDE8 117 aa3.07□□□□□ -1.92
TRAPPC4-207ENST00000526141 C2orf81A6NN90 581 aa3.07□□□□□ -1.92
TRAPPC4-207ENST00000526141 DRGXA6NNA5 263 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms