RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 TRAFD1O14545 582 aaPredicted RBP17.32■□□□□ 0.36
CCS-204ENST00000526066 RIOK3O14730 519 aaKnown RBP17.32■□□□□ 0.36
CCS-204ENST00000526066 MID1O15344 667 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 LEFTY1O75610 366 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 AP2A1O95782 977 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 MT-CYBP00156 380 aaPredicted RBP17.32■□□□□ 0.36
CCS-204ENST00000526066 CTSLP07711 333 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 GKP32189 559 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 DRG2P55039 364 aaKnown RBP17.32■□□□□ 0.36
CCS-204ENST00000526066 WNT3AP56704 352 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 BASP1P80723 227 aaKnown RBP17.32■□□□□ 0.36
CCS-204ENST00000526066 TRAF2Q12933 501 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 ARSIQ5FYB1 569 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 PRAMEF14Q5SWL7 426 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 FAXCQ5TGI0 409 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 HES3Q5TGS1 186 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 FAM46CQ5VWP2 391 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 PCGF5Q86SE9 256 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 MMAAQ8IVH4 418 aaKnown RBP17.32■□□□□ 0.36
CCS-204ENST00000526066 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.32■□□□□ 0.36
CCS-204ENST00000526066 GRIN3AQ8TCU5 1115 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 ECHDC3Q96DC8 303 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 FEM1CQ96JP0 617 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 SERAC1Q96JX3 654 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 TDRD1Q9BXT4 1180 aaKnown RBP17.32■□□□□ 0.36
CCS-204ENST00000526066 SUV39H2Q9H5I1 410 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 LRRC40Q9H9A6 602 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 DKK3Q9UBP4 350 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 RAI2Q9Y5P3 530 aa17.32■□□□□ 0.36
CCS-204ENST00000526066 TSPAN11A1L157 253 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 BHMG1C9JSJ3 638 aaPredicted RBP17.31■□□□□ 0.36
CCS-204ENST00000526066 E7EVH7 732 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 F5H423 210 aaPredicted RBP17.31■□□□□ 0.36
CCS-204ENST00000526066 DNALI1O14645 258 aaPredicted RBP17.31■□□□□ 0.36
CCS-204ENST00000526066 PMPCBO75439 489 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 SUN1O94901 812 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 ADH1BP00325 375 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 UGT2B4P06133 528 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 TPSB2P20231 275 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 EPHA8P29322 1005 aaPredicted RBP17.31■□□□□ 0.36
CCS-204ENST00000526066 SLC8A1P32418 973 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 EIF2S3P41091 472 aaKnown RBP17.31■□□□□ 0.36
CCS-204ENST00000526066 PSMD8P48556 350 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 CCR5P51681 352 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 RPL26P61254 145 aaKnown RBP17.31■□□□□ 0.36
CCS-204ENST00000526066 MRPS25P82663 173 aaKnown RBP17.31■□□□□ 0.36
CCS-204ENST00000526066 TARDBPQ13148 414 aaKnown RBP eCLIP17.31■□□□□ 0.36
CCS-204ENST00000526066 DNAJC3Q13217 504 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 ILKQ13418 452 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 TPSAB1Q15661 275 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 ZNF805Q5CZA5 627 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 CAMK1DQ8IU85 385 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 BBOF1Q8ND07 529 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 OR14C36Q8NHC7 312 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 SAP25Q8TEE9 199 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 SEC14L1Q92503 715 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 CPT1BQ92523 772 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 SNF8Q96H20 258 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 MRGPRX2Q96LB1 330 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 FCRL3Q96P31 734 aaPredicted RBP17.31■□□□□ 0.36
CCS-204ENST00000526066 TRIB3Q96RU7 358 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 ORAI3Q9BRQ5 295 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 NRSN2Q9GZP1 204 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 NEUROG2Q9H2A3 272 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 UBP1Q9NZI7 540 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 RPL26L1Q9UNX3 145 aaKnown RBP17.31■□□□□ 0.36
CCS-204ENST00000526066 PCDHGC4Q9Y5F7 938 aa17.31■□□□□ 0.36
CCS-204ENST00000526066 LOC285095A0A1B0GVY8 99 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 SMAPO00193 183 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 ATXN7O15265 892 aaPredicted RBP17.3■□□□□ 0.36
CCS-204ENST00000526066 FZD6O60353 706 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 MAGEC1O60732 1142 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 SEC31AO94979 1220 aaKnown RBP17.3■□□□□ 0.36
CCS-204ENST00000526066 HEXIM1O94992 359 aaKnown RBP17.3■□□□□ 0.36
CCS-204ENST00000526066 PGLSO95336 258 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 PIGNO95427 931 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 IL1BP01584 269 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 APRTP07741 180 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 C5AR1P21730 350 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 ITGB7P26010 798 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 ITPKBP27987 946 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 ADRA1AP35348 466 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 ACADVLP49748 655 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 CDK18Q07002 472 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 KCNJ11Q14654 390 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 KCTD19Q17RG1 926 aaPredicted RBP17.3■□□□□ 0.36
CCS-204ENST00000526066 ARMC12Q5T9G4 340 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 RNASEH2BQ5TBB1 312 aaKnown RBP17.3■□□□□ 0.36
CCS-204ENST00000526066 NAPEPLDQ6IQ20 393 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 BRAT1Q6PJG6 821 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 LINC00523Q86TU6 105 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 HOOK3Q86VS8 718 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 PPIL6Q8IXY8 311 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 TAB3Q8N5C8 712 aaPredicted RBP17.3■□□□□ 0.36
CCS-204ENST00000526066 NAT8LQ8N9F0 302 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 LSM14AQ8ND56 463 aaKnown RBP17.3■□□□□ 0.36
CCS-204ENST00000526066 IPMKQ8NFU5 416 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 PPP1R16AQ96I34 528 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 KLHL32Q96NJ5 620 aa17.3■□□□□ 0.36
CCS-204ENST00000526066 FSD1LQ9BXM9 530 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms