RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 CD84Q9UIB8 345 aa18.54■□□□□ 0.56
CAPN1-203ENST00000525013 PRSS38A1L453 326 aa18.53■□□□□ 0.56
CAPN1-203ENST00000525013 C3orf70A6NLC5 250 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-203ENST00000525013 ZNF487B1APH4 448 aa18.53■□□□□ 0.56
CAPN1-203ENST00000525013 MPOP05164 745 aa18.53■□□□□ 0.56
CAPN1-203ENST00000525013 COMTP21964 271 aa18.53■□□□□ 0.56
CAPN1-203ENST00000525013 CD86P42081 329 aa18.53■□□□□ 0.56
CAPN1-203ENST00000525013 DYNLT1P63172 113 aa18.53■□□□□ 0.56
CAPN1-203ENST00000525013 PPIDQ08752 370 aaKnown RBP18.53■□□□□ 0.56
CAPN1-203ENST00000525013 ISXQ2M1V0 245 aa18.53■□□□□ 0.56
CAPN1-203ENST00000525013 SLC9A4Q6AI14 798 aa18.53■□□□□ 0.56
CAPN1-203ENST00000525013 RBM44Q6ZP01 1051 aaKnown RBP18.53■□□□□ 0.56
CAPN1-203ENST00000525013 RFLNAQ6ZTI6 216 aa18.53■□□□□ 0.56
CAPN1-203ENST00000525013 LPCAT1Q8NF37 534 aa18.53■□□□□ 0.56
CAPN1-203ENST00000525013 TDRD1Q9BXT4 1180 aaKnown RBP18.53■□□□□ 0.56
CAPN1-203ENST00000525013 TEX101Q9BY14 249 aa18.53■□□□□ 0.56
CAPN1-203ENST00000525013 CARS2Q9HA77 564 aaKnown RBP18.53■□□□□ 0.56
CAPN1-203ENST00000525013 PCDH9Q9HC56 1237 aa18.53■□□□□ 0.56
CAPN1-203ENST00000525013 DDX56Q9NY93 547 aaKnown RBP18.53■□□□□ 0.56
CAPN1-203ENST00000525013 SEPT10Q9P0V9 454 aa18.53■□□□□ 0.56
CAPN1-203ENST00000525013 TLX3O43711 291 aaPredicted RBP18.52■□□□□ 0.56
CAPN1-203ENST00000525013 ZFXP17010 805 aaPredicted RBP18.52■□□□□ 0.56
CAPN1-203ENST00000525013 ACTN2P35609 894 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 GPR1P46091 355 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 GABREP78334 506 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 CDK3Q00526 305 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 SPIDRQ14159 915 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 PDK1Q15118 436 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 TCEAL1Q15170 157 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 NPNTQ6UXI9 565 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 TECPR1Q7Z6L1 1165 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 VSIG1Q86XK7 387 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 CCDC74AQ96AQ1 378 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 AP2M1Q96CW1 435 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 CEP41Q9BYV8 373 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 ABCG8Q9H221 673 aa18.52■□□□□ 0.56
CAPN1-203ENST00000525013 ZFHX4Q86UP3 3567 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 A0A087WV48 116 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 CASC3O15234 703 aaKnown RBP18.51■□□□□ 0.55
CAPN1-203ENST00000525013 PRLP01236 227 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 ZNF30P17039 623 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 RPL26P61254 145 aaKnown RBP18.51■□□□□ 0.55
CAPN1-203ENST00000525013 IFI35P80217 286 aaPredicted RBP18.51■□□□□ 0.55
CAPN1-203ENST00000525013 PTSQ03393 145 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 DPTQ07507 201 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 ZBTB17Q13105 803 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 SPA17Q15506 151 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 FAM182AQ5T1J6 154 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 DOK6Q6PKX4 331 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 MFSD7Q6UXD7 560 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 LRRC69Q6ZNQ3 347 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 CCL4L1Q8NHW4 92 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 WDR48Q8TAF3 677 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 FGF11Q92914 225 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 SCAMP4Q969E2 229 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 ATXN7L3BQ96GX2 97 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 DPEP2Q9H4A9 486 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 DNPEPQ9ULA0 475 aa18.51■□□□□ 0.55
CAPN1-203ENST00000525013 RPL26L1Q9UNX3 145 aaKnown RBP18.51■□□□□ 0.55
CAPN1-203ENST00000525013 COL27A1Q8IZC6 1860 aaPredicted RBP18.51■□□□□ 0.55
CAPN1-203ENST00000525013 PTPRQQ9UMZ3 2332 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 ZFC3H1O60293 1989 aaKnown RBP18.5■□□□□ 0.55
CAPN1-203ENST00000525013 CAPN8A6NHC0 703 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 B4DGG1 531 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 PPP1R12AO14974 1030 aaPredicted RBP18.5■□□□□ 0.55
CAPN1-203ENST00000525013 RRP8O43159 456 aaKnown RBP18.5■□□□□ 0.55
CAPN1-203ENST00000525013 TCEA3O75764 348 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 CLDN7O95471 211 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 CEACAM5P06731 702 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 GNPDA1P46926 289 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 LSSP48449 732 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 POLD2P49005 469 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 STC1P52823 247 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 LLGL1Q15334 1064 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 C3orf38Q5JPI3 329 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 B4GALNT4Q76KP1 1039 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 CNTD1Q8N815 330 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 OR6C4Q8NGE1 309 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 AGAP3Q96P47 875 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 FRMD8Q9BZ67 464 aaPredicted RBP18.5■□□□□ 0.55
CAPN1-203ENST00000525013 GOLPH3Q9H4A6 298 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 POLR1BQ9H9Y6 1135 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 RABGEF1Q9UJ41 708 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 SUFUQ9UMX1 484 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 PCDHA13Q9Y5I0 950 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 ALG6Q9Y672 507 aa18.5■□□□□ 0.55
CAPN1-203ENST00000525013 C1orf232A0A0U1RR37 186 aa18.49■□□□□ 0.55
CAPN1-203ENST00000525013 FUCA1P04066 466 aa18.49■□□□□ 0.55
CAPN1-203ENST00000525013 MMP2P08253 660 aa18.49■□□□□ 0.55
CAPN1-203ENST00000525013 TEAD1P28347 426 aa18.49■□□□□ 0.55
CAPN1-203ENST00000525013 CYLC1P35663 651 aaPredicted RBP18.49■□□□□ 0.55
CAPN1-203ENST00000525013 EIF2S3P41091 472 aaKnown RBP18.49■□□□□ 0.55
CAPN1-203ENST00000525013 ZNF75DP51815 510 aa18.49■□□□□ 0.55
CAPN1-203ENST00000525013 CCL7P80098 99 aa18.49■□□□□ 0.55
CAPN1-203ENST00000525013 SKOR1P84550 965 aa18.49■□□□□ 0.55
CAPN1-203ENST00000525013 ILF3Q12906 894 aaKnown RBP eCLIP18.49■□□□□ 0.55
CAPN1-203ENST00000525013 TFDP2Q14188 446 aa18.49■□□□□ 0.55
CAPN1-203ENST00000525013 TBC1D25Q3MII6 688 aa18.49■□□□□ 0.55
CAPN1-203ENST00000525013 KAZNQ674X7 775 aa18.49■□□□□ 0.55
CAPN1-203ENST00000525013 FOXR1Q6PIV2 292 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms