RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 MGAT1P26572 445 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 ACTN2P35609 894 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 FDFT1P37268 417 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 PLA2G5P39877 138 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 ADCY8P40145 1251 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 TNNT3P45378 269 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 GPR1P46091 355 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 SPINT3P49223 89 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 CDKN1CP49918 316 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 ARSDP51689 593 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 AFF3P51826 1226 aaKnown RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 STC1P52823 247 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 ATXN3P54252 364 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 RACK1P63244 317 aaKnown RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 CCDC15Q0P6D6 951 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 SEMA5AQ13591 1074 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 CKAP5Q14008 2032 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 FZD2Q14332 565 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 SHBQ15464 509 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 CHRNA6Q15825 494 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 HLA-BQ31612 363 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 RALGPS1Q5JS13 557 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 IZUMO3Q5VZ72 239 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 RAET1GQ6H3X3 334 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 PNCKQ6P2M8 343 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 NEK5Q6P3R8 708 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 DRICH1Q6PGQ1 229 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 ENPP7Q6UWV6 458 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 FAM151BQ6UXP7 276 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 TMC3Q7Z5M5 1100 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 TECPR1Q7Z6L1 1165 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 C11orf74Q86VG3 221 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 HEATR4Q86WZ0 1026 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 JAMLQ86YT9 394 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 SFTPA2Q8IWL1 248 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 NDUFAF2Q8N183 169 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 CBARPQ8N350 705 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 MINDY1Q8N5J2 469 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 TMEM145Q8NBT3 493 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 OR4K2Q8NGD2 314 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 CCHCR1Q8TD31 782 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 HCAR2Q8TDS4 363 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 OR1E3Q8WZA6 343 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 CPT1BQ92523 772 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 AP2M1Q96CW1 435 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 DTD2Q96FN9 168 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 KLHDC7BQ96G42 594 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 LOXL4Q96JB6 756 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 DNAJC1Q96KC8 554 aaKnown RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 MCCC1Q96RQ3 725 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 NAP1L3Q99457 506 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 SPATA16Q9BXB7 569 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 NUSAP1Q9BXS6 441 aaKnown RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 FRMD8P1Q9BZ68 369 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 GAREM1Q9H706 876 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 LRRC40Q9H9A6 602 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 ZFYVE1Q9HBF4 777 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 CAPN10Q9HC96 672 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 MAGEE1Q9HCI5 957 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 VPS45Q9NRW7 570 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 HOMER3Q9NSC5 361 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 UCKL1Q9NWZ5 548 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 DNAJC28Q9NX36 388 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 IL1RAPL1Q9NZN1 696 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 PAK5Q9P286 719 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 KLF15Q9UIH9 416 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 FKBPLQ9UIM3 349 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 CDC23Q9UJX2 597 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 DMTF1Q9Y222 760 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 AAR2Q9Y312 384 aaKnown RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 SNX24Q9Y343 169 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 NEU2Q9Y3R4 380 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 PLEKHM1Q9Y4G2 1056 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 PCYT1BQ9Y5K3 369 aaPredicted RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 MRFAP1Q9Y605 127 aa4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 OAS3Q9Y6K5 1087 aaKnown RBP4.59□□□□□ -1.67
CHMP4A-202ENST00000524955 ZDBF2Q9HCK1 2354 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 CACNA1IQ9P0X4 2223 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 EML5Q05BV3 1969 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 TRBV23OR9-2A0A075B6M9 112 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 A0A1W2PQ67 120 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 ESYT3A0FGR9 886 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 EFCAB8A8MWE9 144 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 GOLGA8KD6RF30 607 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 GOLGA8TH3BQL2 631 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 GAPDHSO14556 408 aaPredicted RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 ARHGAP33O14559 1287 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 VILLO15195 856 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 CASC3O15234 703 aaKnown RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 STX7O15400 261 aaKnown RBP4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 FFAR2O15552 330 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 LDB2O43679 373 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 ASMTLO95671 621 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 GAS8O95995 478 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 SOD1P00441 154 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 FGF1P05230 155 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF806P0C7X5 589 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 HLA-DPA1P20036 260 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 IVDP26440 423 aa4.58□□□□□ -1.68
CHMP4A-202ENST00000524955 NMBRP28336 390 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms