RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 SAFBQ15424 915 aaKnown RBP eCLIP1.78□□□□□ -2.12
CD44-212ENST00000524922 COBLL1Q53SF7 1204 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 CCSAPQ6IQ19 270 aaPredicted RBP1.78□□□□□ -2.12
CD44-212ENST00000524922 HEPHL1Q6MZM0 1159 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 APOBEC3HQ6NTF7 200 aaKnown RBP1.78□□□□□ -2.12
CD44-212ENST00000524922 RINT1Q6NUQ1 792 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 RNF144BQ7Z419 303 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 GPR142Q7Z601 462 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 ANKS1BQ7Z6G8 1248 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 ZDHHC23Q8IYP9 409 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 FAM185AQ8N0U4 392 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 HORMAD2Q8N7B1 307 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 PJA1Q8NG27 643 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 GPT2Q8TD30 523 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 RSC1A1Q92681 617 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 ZNF566Q969W8 418 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 PABPC5Q96DU9 382 aaKnown RBP1.78□□□□□ -2.12
CD44-212ENST00000524922 PRMT6Q96LA8 375 aaPredicted RBP1.78□□□□□ -2.12
CD44-212ENST00000524922 PGLYRP2Q96PD5 576 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 FRG2BQ96QU4 278 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 SLC25A33Q9BSK2 321 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 MSTO1Q9BUK6 570 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 C1QTNF5Q9BXJ0 243 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 LMAN2LQ9H0V9 348 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 UPF3AQ9H1J1 476 aaKnown RBP1.78□□□□□ -2.12
CD44-212ENST00000524922 CCDC134Q9H6E4 229 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 UBE2ZQ9H832 354 aaPredicted RBP1.78□□□□□ -2.12
CD44-212ENST00000524922 PANK3Q9H999 370 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 VEZTQ9HBM0 779 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 CWC25Q9NXE8 425 aaPredicted RBP1.78□□□□□ -2.12
CD44-212ENST00000524922 DONSONQ9NYP3 566 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 KLHL42Q9P2K6 505 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 IL36RNQ9UBH0 155 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 SLC39A10Q9ULF5 831 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 NFU1Q9UMS0 254 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 Q9Y3F1 56 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 PCDHGB2Q9Y5G2 931 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 ITPR1Q14643 2758 aa1.78□□□□□ -2.12
CD44-212ENST00000524922 LRRC37A2A6NM11 1700 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 IGF2RP11717 2491 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 A0A0U1RQG5 324 aaPredicted RBP1.77□□□□□ -2.13
CD44-212ENST00000524922 C11orf97A0A1B0GVM6 126 aaPredicted RBP1.77□□□□□ -2.13
CD44-212ENST00000524922 GRM8O00222 908 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 ASNA1O43681 348 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 BUB3O43684 328 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 KCNJ13O60928 360 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 LARGE1O95461 756 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 SLC25A27O95847 323 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 CD4P01730 458 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 F7P08709 466 aaPredicted RBP1.77□□□□□ -2.13
CD44-212ENST00000524922 SUPT20HL2P0C7V6 817 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 CFC1BP0CG36 223 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 CFC1P0CG37 223 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 ACTN1P12814 892 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 LYL1P12980 280 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 NAGAP17050 411 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 AVPR2P30518 371 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 DCTDP32321 178 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 ICAM3P32942 547 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 MAGEA9P43362 315 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 RCAN1P53805 252 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 ALDH18A1P54886 795 aaKnown RBP1.77□□□□□ -2.13
CD44-212ENST00000524922 BACE1P56817 501 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 ADORA2A-AS1P86434 159 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 CDK18Q07002 472 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 MYBPC2Q14324 1141 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 BTBD16Q32M84 506 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 C5orf22Q49AR2 442 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 FAM171A1Q5VUB5 890 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 FAM69BQ5VUD6 431 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 FBXO38Q6PIJ6 1188 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 DGLUCYQ7Z3D6 616 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 IGFN1Q86VF2 1251 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 FJX1Q86VR8 437 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 TTC30AQ86WT1 665 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 FMNL3Q8IVF7 1028 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 SCN4BQ8IWT1 228 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 SUGP1Q8IWZ8 645 aaKnown RBP1.77□□□□□ -2.13
CD44-212ENST00000524922 UBALD2Q8IYN6 164 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 NRSN1Q8IZ57 195 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 RBFAQ8N0V3 343 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 GOLGA6L2Q8N9W4 650 aaPredicted RBP1.77□□□□□ -2.13
CD44-212ENST00000524922 LSM14AQ8ND56 463 aaKnown RBP1.77□□□□□ -2.13
CD44-212ENST00000524922 KLHDC9Q8NEP7 349 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 PRSS33Q8NF86 280 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 OR14A16Q8NHC5 309 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 SPATA20Q8TB22 786 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 SLC35F5Q8WV83 523 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 WDR60Q8WVS4 1066 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 SORCS1Q8WY21 1168 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 RSPH1Q8WYR4 309 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 BADQ92934 168 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 INPP4AQ96PE3 977 aaPredicted RBP1.77□□□□□ -2.13
CD44-212ENST00000524922 DUX5Q96PT3 197 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 PLEKHF1Q96S99 279 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 MPHOSPH8Q99549 860 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 FSD1Q9BTV5 496 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 TMEM39BQ9GZU3 492 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 MROH8Q9H579 483 aa1.77□□□□□ -2.13
CD44-212ENST00000524922 CLK4Q9HAZ1 481 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms