RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 SEPT10Q9P0V9 454 aa20.87■□□□□ 0.93
TRAPPC9-215ENST00000524162 PNMA8BQ9ULN7 279 aaPredicted RBP20.87■□□□□ 0.93
TRAPPC9-215ENST00000524162 OR1A2Q9Y585 309 aa20.87■□□□□ 0.93
TRAPPC9-215ENST00000524162 RP1P56715 2156 aa20.87■□□□□ 0.93
TRAPPC9-215ENST00000524162 ACACAQ13085 2346 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 NRDCO43847 1150 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 GP1BAP07359 652 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 PYGMP11217 842 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 CTPS1P17812 591 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 DUSP3P51452 185 aaPredicted RBP20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 SRP54P61011 504 aaKnown RBP20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 E2F1Q01094 437 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 CDK18Q07002 472 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 FAXCQ5TGI0 409 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 ENPP7Q6UWV6 458 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 ADAMTSL4Q6UY14 1074 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 KDM7AQ6ZMT4 941 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 ZC3H18Q86VM9 953 aaKnown RBP20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 TMPRSS12Q86WS5 348 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 LPCAT1Q8NF37 534 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 OR56A4Q8NGH8 313 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 ACTL9Q8TC94 416 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 HAUS1Q96CS2 278 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 FCRL5Q96RD9 977 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 RBM15Q96T37 977 aaKnown RBP eCLIP20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 BOCQ9BWV1 1114 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 HEMGNQ9BXL5 484 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 NFKBIL1Q9UBC1 381 aaPredicted RBP20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 TRIM10Q9UDY6 481 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 KLQ9UEF7 1012 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 FAM153AQ9UHL3 310 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 USP24Q9UPU5 2620 aa20.86■□□□□ 0.93
TRAPPC9-215ENST00000524162 ANKRD11Q6UB99 2663 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 ZFC3H1O60293 1989 aaKnown RBP20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 NDST3O95803 873 aa20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 CD68P34810 354 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 PRRT3Q5FWE3 981 aa20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 CCDC181Q5TID7 509 aa20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 PNPLA1Q8N8W4 532 aa20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 CCHCR1Q8TD31 782 aa20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 PPP1R2P1Q96PQ5 205 aa20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 TMEM121BQ9BXQ6 578 aaPredicted RBP20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 CEP41Q9BYV8 373 aa20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 RAD18Q9NS91 495 aa20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 CAPN6Q9Y6Q1 641 aa20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 ASPMQ8IZT6 3477 aa20.85■□□□□ 0.93
TRAPPC9-215ENST00000524162 MYLKQ15746 1914 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 FREM2Q5SZK8 3169 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 LOC285095A0A1B0GVY8 99 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 TMEM8BA6NDV4 472 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 GOLGA6L9A6NEM1 432 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 DDX3YO15523 660 aaKnown RBP20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 GCATO75600 419 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 TNFP01375 233 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 CCDC175P0C221 793 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 OTUD4Q01804 1114 aaKnown RBP20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 KLF1Q13351 362 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 MPP3Q13368 585 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 LLGL1Q15334 1064 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 CCDC70Q6NSX1 233 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 CCNI2Q6ZMN8 369 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 CDKL3Q8IVW4 592 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 RBFAQ8N0V3 343 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 ZNF567Q8N184 647 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 LMX1AQ8TE12 382 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 SCG3Q8WXD2 468 aaKnown RBP20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 GATA6Q92908 595 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 GLMNQ92990 594 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 AP2M1Q96CW1 435 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 APOLD1Q96LR9 279 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 HERPUD2Q9BSE4 406 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 ABCG8Q9H221 673 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 KLHL8Q9P2G9 620 aaPredicted RBP20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 SCN8AQ9UQD0 1980 aa20.84■□□□□ 0.93
TRAPPC9-215ENST00000524162 LY6G6EA0A0G2JKS1 128 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 A0A0U1RQJ8 604 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 C1orf232A0A0U1RR37 186 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 TMEM202A6NGA9 273 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 FFAR2O15552 330 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 TOP3BO95985 862 aaKnown RBP20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 SOD1P00441 154 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 RBP3P10745 1247 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 SPINT3P49223 89 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 DCDC1P59894 354 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 CDK3Q00526 305 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 DNAJC3Q13217 504 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 C6orf132Q5T0Z8 1188 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 ITPRIPL1Q6GPH6 555 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 PID1Q7Z2X4 250 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 HEATR4Q86WZ0 1026 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 GKN2Q86XP6 184 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 HID1Q8IV36 788 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 SCARF2Q96GP6 870 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 LGR4Q9BXB1 951 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 FRMD8Q9BZ67 464 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 CLPBQ9H078 707 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 TCEAL2Q9H3H9 227 aaPredicted RBP20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 TRABDQ9H4I3 376 aa20.83■□□□□ 0.93
TRAPPC9-215ENST00000524162 ZFYVE1Q9HBF4 777 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms