RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 WDR26Q9H7D7 661 aa12.54□□□□□ -0.4
VEGFA-225ENST00000523950 C10orf88Q9H8K7 445 aa12.54□□□□□ -0.4
VEGFA-225ENST00000523950 ZFYVE1Q9HBF4 777 aa12.54□□□□□ -0.4
VEGFA-225ENST00000523950 PHPT1Q9NRX4 125 aaPredicted RBP12.54□□□□□ -0.4
VEGFA-225ENST00000523950 TRMT1Q9NXH9 659 aaKnown RBP12.54□□□□□ -0.4
VEGFA-225ENST00000523950 UBP1Q9NZI7 540 aa12.54□□□□□ -0.4
VEGFA-225ENST00000523950 PCOLCE2Q9UKZ9 415 aa12.54□□□□□ -0.4
VEGFA-225ENST00000523950 ZNF711Q9Y462 761 aa12.54□□□□□ -0.4
VEGFA-225ENST00000523950 CFAP54Q96N23 3096 aa12.54□□□□□ -0.4
VEGFA-225ENST00000523950 LRP4O75096 1905 aa12.54□□□□□ -0.4
VEGFA-225ENST00000523950 CEP250Q9BV73 2442 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 SCN8AQ9UQD0 1980 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 NEMP2A6NFY4 417 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 ENC1O14682 589 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 TNFRSF10CO14798 259 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 PSMD3O43242 534 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 SH3BP5O60239 455 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 CEP104O60308 925 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 CBFA2T3O75081 653 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 PIAS2O75928 621 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 CLDN7O95471 211 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 MYCLP1P12525 358 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-225ENST00000523950 PSMB4P28070 264 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 ACTN2P35609 894 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 SPINT3P49223 89 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 DCDC1P59894 354 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 IL9RQ01113 521 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 EIF2B5Q13144 721 aaKnown RBP12.53□□□□□ -0.4
VEGFA-225ENST00000523950 SIX1Q15475 284 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-225ENST00000523950 LONRF2Q1L5Z9 754 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 PPM1JQ5JR12 505 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 PRAMEF14Q5SWL7 426 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 RAET1GQ6H3X3 334 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 KANSL1Q7Z3B3 1105 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 TMC3Q7Z5M5 1100 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 GLRX5Q86SX6 157 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 SDR16C5Q8N3Y7 309 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 RASGEF1CQ8N431 466 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 FAM71DQ8N9W8 422 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 PLA2G15Q8NCC3 412 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 DEFB124Q8NES8 71 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 BAHD1Q8TBE0 780 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-225ENST00000523950 ATG4AQ8WYN0 398 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 TMEM121Q9BTD3 319 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 TEX101Q9BY14 249 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 GPR63Q9BZJ6 419 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 ABCG8Q9H221 673 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 DNAJC28Q9NX36 388 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 TTC7AQ9ULT0 858 aaPredicted RBP12.53□□□□□ -0.4
VEGFA-225ENST00000523950 ZNF148Q9UQR1 794 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 DRG1Q9Y295 367 aaKnown RBP12.53□□□□□ -0.4
VEGFA-225ENST00000523950 CSNK1G3Q9Y6M4 447 aa12.53□□□□□ -0.4
VEGFA-225ENST00000523950 ERI2A8K979 691 aaKnown RBP12.52□□□□□ -0.41
VEGFA-225ENST00000523950 RASGRP1O95267 797 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 ALPPL2P10696 532 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 JUNDP17535 347 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 DGKAP23743 735 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 CXCR5P32302 372 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 ADRA1AP35348 466 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 GPR1P46091 355 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 PPARDQ03181 441 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 PTPRRQ15256 657 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 SIRPB2Q5JXA9 342 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 TPRG1LQ5T0D9 272 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 ZDHHC20Q5W0Z9 365 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 PDPK2PQ6A1A2 396 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 PSAPL1Q6NUJ1 521 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 ADAMTSL4Q6UY14 1074 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 C4orf22Q6V702 233 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 RANBP10Q6VN20 620 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 LYSMD3Q7Z3D4 306 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 KDELC2Q7Z4H8 507 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 HEATR4Q86WZ0 1026 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 PHACTR4Q8IZ21 702 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 OR56A4Q8NGH8 313 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 RHBDD1Q8TEB9 315 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 C1orf54Q8WWF1 131 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 FUBP1Q96AE4 644 aaKnown RBP12.52□□□□□ -0.41
VEGFA-225ENST00000523950 SMIM14Q96QK8 99 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 C19orf43Q9BQ61 176 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 GORASP1Q9BQQ3 440 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 DUSP23Q9BVJ7 150 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 SLC13A1Q9BZW2 595 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 KCND1Q9NSA2 647 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.52□□□□□ -0.411e-9■□□□□ 10.2
VEGFA-225ENST00000523950 SPASTQ9UBP0 616 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 APOBEC3BQ9UH17 382 aaKnown RBP12.52□□□□□ -0.41
VEGFA-225ENST00000523950 PYCARDQ9ULZ3 195 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 OR1A2Q9Y585 309 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 CABIN1Q9Y6J0 2220 aa12.52□□□□□ -0.41
VEGFA-225ENST00000523950 DMXL1Q9Y485 3027 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 LAMA1P25391 3075 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 TDRD6O60522 2096 aaKnown RBP12.51□□□□□ -0.41
VEGFA-225ENST00000523950 TPP1O14773 563 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 PPFIA2O75334 1257 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 ATP1A1P05023 1023 aaKnown RBP12.51□□□□□ -0.41
VEGFA-225ENST00000523950 TCP1P17987 556 aaKnown RBP12.51□□□□□ -0.41
VEGFA-225ENST00000523950 HMGCLP35914 325 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 FDFT1P37268 417 aa12.51□□□□□ -0.41
VEGFA-225ENST00000523950 HK3P52790 923 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms