RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SCAMP4Q969E2 229 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 FUBP1Q96AE4 644 aaKnown RBP12.81□□□□□ -0.36
VEGFA-224ENST00000523873 SKA1Q96BD8 255 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 C16orf45Q96MC5 204 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-224ENST00000523873 GPR63Q9BZJ6 419 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 ZDHHC5Q9C0B5 715 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 ZFYVE1Q9HBF4 777 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 MAGEE1Q9HCI5 957 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 BPIFA1Q9NP55 256 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 GDF3Q9NR23 364 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 GPR27Q9NS67 375 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 SAR1BQ9Y6B6 198 aa12.81□□□□□ -0.36
VEGFA-224ENST00000523873 ARHGEF17Q96PE2 2063 aaPredicted RBP12.81□□□□□ -0.36
VEGFA-224ENST00000523873 SCAMP1O15126 338 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 FOXD2O60548 495 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-224ENST00000523873 SDC3O75056 442 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 PHF2O75151 1096 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 CER1O95813 267 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 EPOP01588 193 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 FGF1P05230 155 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 HLA-DPA1P20036 260 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 TNNT3P45378 269 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-224ENST00000523873 RABIFP47224 123 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 ETF1P62495 437 aaKnown RBP12.8□□□□□ -0.36
VEGFA-224ENST00000523873 EIF2B5Q13144 721 aaKnown RBP12.8□□□□□ -0.36
VEGFA-224ENST00000523873 FZD2Q14332 565 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 PTPRCAPQ14761 206 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 CYP1B1Q16678 543 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 KCTD16Q68DU8 428 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 RAET1GQ6H3X3 334 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 DENND5AQ6IQ26 1287 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 ESRP1Q6NXG1 681 aaKnown RBP12.8□□□□□ -0.36
VEGFA-224ENST00000523873 PNCKQ6P2M8 343 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 CCDC137Q6PK04 289 aaKnown RBP12.8□□□□□ -0.36
VEGFA-224ENST00000523873 RANBP10Q6VN20 620 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 MICALCLQ6ZW33 695 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 TMC3Q7Z5M5 1100 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 GATAD2AQ86YP4 633 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 TTC30BQ8N4P2 665 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 NETO1Q8TDF5 533 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 AP2M1Q96CW1 435 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 TRIM44Q96DX7 344 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-224ENST00000523873 NAP1L3Q99457 506 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-224ENST00000523873 ELF4Q99607 663 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-224ENST00000523873 APOOQ9BUR5 198 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 RIOK2Q9BVS4 552 aaKnown RBP12.8□□□□□ -0.36
VEGFA-224ENST00000523873 LGR4Q9BXB1 951 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 RAB6BQ9NRW1 208 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 HOMER3Q9NSC5 361 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 PAK5Q9P286 719 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 PNMA8BQ9ULN7 279 aaPredicted RBP12.8□□□□□ -0.36
VEGFA-224ENST00000523873 PCNX2A6NKB5 2137 aa12.8□□□□□ -0.36
VEGFA-224ENST00000523873 A0A1B0GTQ1 180 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 MAGEC1O60732 1142 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 AP2A1O95782 977 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 SOD1P00441 154 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 TPH1P17752 444 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 ACTN2P35609 894 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 FDFT1P37268 417 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 GRIA1P42261 906 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 GPR1P46091 355 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 SPINT3P49223 89 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 LMAN1P49257 510 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 THOP1P52888 689 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 ARHGAP8P85298 464 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 OVGP1Q12889 678 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 BNIP3Q12983 259 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 MTM1Q13496 603 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 TCEA2Q15560 299 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 IL27RAQ6UWB1 636 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 GLT6D1Q7Z4J2 308 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 TRIM74Q86UV6 250 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 GPR26Q8NDV2 337 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 OR52K1Q8NGK4 314 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 ATL2Q8NHH9 583 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 CCHCR1Q8TD31 782 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 DDX47Q9H0S4 455 aaKnown RBP12.79□□□□□ -0.36
VEGFA-224ENST00000523873 TCEAL2Q9H3H9 227 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-224ENST00000523873 LRRC40Q9H9A6 602 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 TM7SF3Q9NS93 570 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 DNAAF2Q9NVR5 837 aaKnown RBP12.79□□□□□ -0.36
VEGFA-224ENST00000523873 DNAJC28Q9NX36 388 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 PKD2L2Q9NZM6 624 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 KLF15Q9UIH9 416 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 CDV3Q9UKY7 258 aaKnown RBP12.79□□□□□ -0.36
VEGFA-224ENST00000523873 KCTD3Q9Y597 815 aa12.79□□□□□ -0.36
VEGFA-224ENST00000523873 PIKFYVEQ9Y2I7 2098 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 GOLGA6L10A0A0M3HER8 536 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 SPTY2D1-AS1A0A0U1RR47 76 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 FADS2P1A8MWK0 482 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 E7EVH7 732 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 INPP4BO15327 924 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 KRT14P02533 472 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 CD59P13987 128 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 TSHRP16473 764 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 BPIP17213 487 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 CCT8P50990 548 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 LIMK1P53667 647 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 YPEL5P62699 121 aa12.78□□□□□ -0.36
VEGFA-224ENST00000523873 BASP1P80723 227 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms