RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 LOC105369274A0A096LPK9 316 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 LOC102723532A0A0G2JNH3 316 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 PNMA6EA0A0J9YXQ4 647 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 DDTLA6NHG4 134 aaPredicted RBP4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 SMTNL1A8MU46 457 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 NKX2-8O15522 239 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 DUSP11O75319 330 aaKnown RBP4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 NEURL1O76050 574 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 NFATC1O95644 943 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 GLUD1P00367 558 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 CYP1A2P05177 515 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 HARSP12081 509 aaKnown RBP4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 DNAJB1P25685 340 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 GLUD2P49448 558 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 CSRP3P50461 194 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 BACE1P56817 501 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 CHAF1AQ13111 956 aaPredicted RBP4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 GPNMBQ14956 572 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 SLC35G1Q2M3R5 365 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 C9orf57Q5W0N0 161 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 CDC42EP5Q6NZY7 148 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 SPSB3Q6PJ21 355 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 C15orf52Q6ZUT6 534 aaKnown RBP4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 CYB5R4Q7L1T6 521 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 TTC30AQ86WT1 665 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 FMNL3Q8IVF7 1028 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 OR4N4Q8N0Y3 316 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 ENGASEQ8NFI3 743 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 MOV10L1Q9BXT6 1211 aaKnown RBP4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 LMAN2LQ9H0V9 348 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 UPF3AQ9H1J1 476 aaKnown RBP4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 S1PR5Q9H228 398 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 POMKQ9H5K3 350 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 SFXN1Q9H9B4 322 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 HELLSQ9NRZ9 838 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 FBXO4Q9UKT5 387 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 ZHX1Q9UKY1 873 aaPredicted RBP4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 DUSP12Q9UNI6 340 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 PTPRBP23467 1997 aa4.1□□□□□ -1.75
NSMCE2-211ENST00000523549 MYH15Q9Y2K3 1946 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 HIVEP3Q5T1R4 2406 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 PER2O15055 1255 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 FGF18O76093 207 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 MMP1P03956 469 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 PGK2P07205 417 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 POLE2P56282 527 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 SHROOM1Q2M3G4 852 aaPredicted RBP4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 COBLL1Q53SF7 1204 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 FAM76BQ5HYJ3 339 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 MYOCDQ8IZQ8 938 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 CLIP4Q8N3C7 705 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 ADAMTS14Q8WXS8 1223 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 MCRS1Q96EZ8 462 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 CCDC136Q96JN2 1154 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 WDR77Q9BQA1 342 aaPredicted RBP4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 SARGQ9BW04 601 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 NECTIN3Q9NQS3 549 aa4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.09□□□□□ -1.75
NSMCE2-211ENST00000523549 ADAMTS9Q9P2N4 1935 aa4.09□□□□□ -1.76
NSMCE2-211ENST00000523549 NOTCH3Q9UM47 2321 aa4.09□□□□□ -1.76
NSMCE2-211ENST00000523549 I6L893 689 aaPredicted RBP4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 M0QYT0 321 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 ASTN1O14525 1302 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 CAPN9O14815 690 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 PCDH17O14917 1159 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 STRNO43815 780 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 LCKP06239 509 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 WEE2P0C1S8 567 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 LINC00271P0C7V0 271 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 ELAVL4P26378 380 aaKnown RBP4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 GYG1P46976 350 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 SELENOVP59797 346 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 KRTAP10-12P60413 245 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 TLE3Q04726 772 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 DSC1Q08554 894 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 TDGQ13569 410 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 SAFBQ15424 915 aaKnown RBP eCLIP4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 TAF7Q15545 349 aaPredicted RBP4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 ENTPD8Q5MY95 495 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 FNBP1LQ5T0N5 605 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 MROH5Q6ZUA9 1318 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 CADM3Q8N126 398 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 TDRD5Q8NAT2 981 aaKnown RBP4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 KDM1BQ8NB78 822 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 PJA1Q8NG27 643 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 ATP8B4Q8TF62 1192 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 YME1L1Q96TA2 773 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 NAA15Q9BXJ9 866 aaKnown RBP4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 METTL14Q9HCE5 456 aaKnown RBP4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 STAB1Q9NY15 2570 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 KLHL42Q9P2K6 505 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 IL17BQ9UHF5 180 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 CNPY2Q9Y2B0 182 aa4.08□□□□□ -1.76
NSMCE2-211ENST00000523549 ABHD14A-ACY1A0A1B0GW23 586 aa4.07□□□□□ -1.76
NSMCE2-211ENST00000523549 CXorf65A6NEN9 183 aa4.07□□□□□ -1.76
NSMCE2-211ENST00000523549 C3orf70A6NLC5 250 aaPredicted RBP4.07□□□□□ -1.76
NSMCE2-211ENST00000523549 C5orf67F2Z3F1 127 aa4.07□□□□□ -1.76
NSMCE2-211ENST00000523549 NBNO60934 754 aa4.07□□□□□ -1.76
NSMCE2-211ENST00000523549 FRAT2O75474 233 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms