RNA–Protein interactions for RNA: ENST00000521671.1

ATP6V1C1-206, Transcript of ATPase H+ transporting V1 subunit C1, humanhuman

TSL 3

Gene ATP6V1C1, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C1-206ENST00000521671 TBC1D20Q96BZ9 403 aa3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 FBXL8Q96CD0 374 aa3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 ST6GAL2Q96JF0 529 aa3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 LRR1Q96L50 414 aa3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 TWNKQ96RR1 684 aa3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 RPS6KC1Q96S38 1066 aa3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 ATOH8Q96SQ7 321 aa3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 SIN3AQ96ST3 1273 aa3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 EGFL8Q99944 293 aa3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 UBXN6Q9BZV1 441 aa3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 ESRP2Q9H6T0 727 aaKnown RBP3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 DDX4Q9NQI0 724 aaKnown RBP3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 ZNF624Q9P2J8 865 aaPredicted RBP3.43□□□□□ -1.86
ATP6V1C1-206ENST00000521671 VWA3AA6NCI4 1184 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 PEX12O00623 359 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 LDHAP00338 332 aaKnown RBP3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 ETFAP13804 333 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 MMP14P50281 582 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 EEF1A1P68104 462 aaKnown RBP3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 GPATCH4Q5T3I0 446 aaKnown RBP3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 EEF1A1P5Q5VTE0 462 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 LRRC8EQ6NSJ5 796 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 FAM160B2Q86V87 743 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 C2CD5Q86YS7 1000 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 SUGP1Q8IWZ8 645 aaKnown RBP3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 ZNF34Q8IZ26 560 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 SPATA5Q8NB90 893 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 COG8Q96MW5 612 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 CD180Q99467 661 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 CLSTN3Q9BQT9 956 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 POLR3CQ9BUI4 534 aaPredicted RBP3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 NUF2Q9BZD4 464 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 STN1Q9H668 368 aaKnown RBP3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 UPF2Q9HAU5 1272 aaKnown RBP3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 MKKSQ9NPJ1 570 aaPredicted RBP3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 SLC7A10Q9NS82 523 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 MAP3K20Q9NYL2 800 aaKnown RBP3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 DLGAP4Q9Y2H0 992 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 OR2W1Q9Y3N9 320 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 STON1Q9Y6Q2 735 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 RNF215Q9Y6U7 377 aa3.42□□□□□ -1.86
ATP6V1C1-206ENST00000521671 IGKV6D-41A0A0C4DH26 115 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 FAM90A7PA6NKC0 464 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 SH2D7A6NKC9 451 aaPredicted RBP3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 FAM90A22PA8MWA6 464 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 FAM90A12PA8MX19 464 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 FAM90A23PA8MXZ1 464 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 SMIM1B2RUZ4 78 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 KLK10O43240 276 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 TSPAN3O60637 253 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 TCEA3O75764 348 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 IGLV1-44P01699 117 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 MMP2P08253 660 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 DDX5P17844 614 aaKnown RBP3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 CHRNB4P30926 498 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 CORO1AP31146 461 aaKnown RBP3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 HNRNPH2P55795 449 aaKnown RBP3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 GNB1P62873 340 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 IRX1P78414 480 aaPredicted RBP3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 CHRNDQ07001 517 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 GTF2H2Q13888 395 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 FBXO47Q5MNV8 452 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 ANKRD54Q6NXT1 300 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 GTF2H2CQ6P1K8 395 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 ATF7IPQ6VMQ6 1270 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 C15orf39Q6ZRI6 1047 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 ASB18Q6ZVZ8 466 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 NOTCH2NLQ7Z3S9 236 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 NOXA1Q86UR1 476 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 APLFQ8IW19 511 aaPredicted RBP3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 NKAPQ8N5F7 415 aaKnown RBP3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 BEST2Q8NFU1 509 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 OR2AK2Q8NG84 335 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 SCRN2Q96FV2 425 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 ITM2CQ9NQX7 267 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 CACNA1FO60840 1977 aa3.41□□□□□ -1.86
ATP6V1C1-206ENST00000521671 KRTAP16-1A8MUX0 517 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 HHLA1C9JL84 531 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 BCAT2O15382 392 aaPredicted RBP3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 IGHV4-39P01824 125 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 CYC1P08574 325 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 DCTP40126 519 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 EFNA5P52803 228 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 IRX6P78412 446 aaPredicted RBP3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 PDE1BQ01064 536 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 ZNF234Q14588 700 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 NAA25Q14CX7 972 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 CCDC96Q2M329 555 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 EIF2S3LQ2VIR3 472 aaKnown RBP3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 SERTAD4-AS1Q5TG53 156 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 STPG4Q8N801 248 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 STAMQ92783 540 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 STAMBPL1Q96FJ0 436 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 ARPC5LQ9BPX5 153 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 PYM1Q9BRP8 204 aaKnown RBP3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 TAOK3Q9H2K8 898 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 MROH8Q9H579 483 aa3.4□□□□□ -1.87
ATP6V1C1-206ENST00000521671 SLC52A3Q9NQ40 469 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms