RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 C3orf20Q8ND61 904 aa11.49□□□□□ -0.57
MRPS28-206ENST00000520946 NSMCE1Q8WV22 266 aa11.49□□□□□ -0.57
MRPS28-206ENST00000520946 ABHD17AQ96GS6 310 aa11.49□□□□□ -0.57
MRPS28-206ENST00000520946 SLC45A3Q96JT2 553 aa11.49□□□□□ -0.57
MRPS28-206ENST00000520946 MCEEQ96PE7 176 aa11.49□□□□□ -0.57
MRPS28-206ENST00000520946 CTRCQ99895 268 aa11.49□□□□□ -0.57
MRPS28-206ENST00000520946 ZPBPQ9BS86 351 aa11.49□□□□□ -0.57
MRPS28-206ENST00000520946 NAA15Q9BXJ9 866 aaKnown RBP11.49□□□□□ -0.57
MRPS28-206ENST00000520946 SLC39A8Q9C0K1 460 aa11.49□□□□□ -0.57
MRPS28-206ENST00000520946 VPS16Q9H269 839 aa11.49□□□□□ -0.57
MRPS28-206ENST00000520946 TRIT1Q9H3H1 467 aaKnown RBP11.49□□□□□ -0.57
MRPS28-206ENST00000520946 DHX35Q9H5Z1 703 aaKnown RBP11.49□□□□□ -0.57
MRPS28-206ENST00000520946 NLRC4Q9NPP4 1024 aa11.49□□□□□ -0.57
MRPS28-206ENST00000520946 FAM207AQ9NSI2 230 aaPredicted RBP11.49□□□□□ -0.57
MRPS28-206ENST00000520946 OCIAD1Q9NX40 245 aa11.49□□□□□ -0.57
MRPS28-206ENST00000520946 B4GALT6Q9UBX8 382 aa11.49□□□□□ -0.57
MRPS28-206ENST00000520946 NOCTQ9UK39 431 aaKnown RBP11.49□□□□□ -0.57
MRPS28-206ENST00000520946 IGHV1OR21-1A0A087WYE8 117 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 B4E171 279 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 PPM1DO15297 605 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 CEACAM5P06731 702 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 THRAP10827 490 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 VIPR1P32241 457 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 ADCY8P40145 1251 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 TSPAN7P41732 249 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 MAPK9P45984 424 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 RGRP47804 291 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 CDK3Q00526 305 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 KLRB1Q12918 225 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 NRROSQ86YC3 692 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 UNC5BQ8IZJ1 945 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 PATE1Q8WXA2 126 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 NCSTNQ92542 709 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 PMEPA1Q969W9 287 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 OR2M4Q96R27 311 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 CNPY3Q9BT09 278 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 TEX101Q9BY14 249 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 LRRC19Q9H756 370 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 PDFQ9HBH1 243 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 TAB2Q9NYJ8 693 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 AP4E1Q9UPM8 1137 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 PLAAQ9Y263 795 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 MAN2B2Q9Y2E5 1009 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 ANKRD36A6QL64 1941 aa11.48□□□□□ -0.57
MRPS28-206ENST00000520946 LRRK1Q38SD2 2015 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 BLACEA4D250 179 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 PRR19A6NJB7 356 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 MKRN2OSH3BPM6 223 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 POLR1CO15160 346 aaPredicted RBP11.47□□□□□ -0.57
MRPS28-206ENST00000520946 ASMTLO95671 621 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 CPP00450 1065 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 CHRNB2P17787 502 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 EEF1GP26641 437 aaKnown RBP11.47□□□□□ -0.57
MRPS28-206ENST00000520946 ETV3P41162 512 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 POLD2P49005 469 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 IL10RBQ08334 325 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 LBRQ14739 615 aaKnown RBP11.47□□□□□ -0.57
MRPS28-206ENST00000520946 NR1D2Q14995 579 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 CLEC16AQ2KHT3 1053 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 PPP6R3Q5H9R7 873 aaPredicted RBP11.47□□□□□ -0.57
MRPS28-206ENST00000520946 MARK2Q7KZI7 788 aaKnown RBP11.47□□□□□ -0.57
MRPS28-206ENST00000520946 C17orf82Q86X59 251 aaPredicted RBP11.47□□□□□ -0.57
MRPS28-206ENST00000520946 ZNF761Q86XN6 746 aaPredicted RBP11.47□□□□□ -0.57
MRPS28-206ENST00000520946 GALNT13Q8IUC8 556 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 NAGSQ8N159 534 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 EFCAB3Q8N7B9 438 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 STARD8Q92502 1023 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 SH3KBP1Q96B97 665 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 ECHDC3Q96DC8 303 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 COQ10AQ96MF6 247 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 GPATCH2LQ9NWQ4 482 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 KLHL3Q9UH77 587 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 PILRAQ9UKJ1 303 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 PHTF1Q9UMS5 762 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 SDK2Q58EX2 2172 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 ARHGEF17Q96PE2 2063 aaPredicted RBP11.47□□□□□ -0.57
MRPS28-206ENST00000520946 LRP4O75096 1905 aa11.47□□□□□ -0.57
MRPS28-206ENST00000520946 PTPN13Q12923 2485 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 EIF3CLB5ME19 914 aaKnown RBP11.46□□□□□ -0.57
MRPS28-206ENST00000520946 INPP4BO15327 924 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 VPS4BO75351 444 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 RNF8O76064 485 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 STK17BO94768 372 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 HEXIM1O94992 359 aaKnown RBP11.46□□□□□ -0.57
MRPS28-206ENST00000520946 IVLP07476 585 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 CCDC172P0C7W6 258 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 UNGP13051 313 aaPredicted RBP11.46□□□□□ -0.57
MRPS28-206ENST00000520946 PSMA2P25787 234 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 HSPA9P38646 679 aaKnown RBP11.46□□□□□ -0.57
MRPS28-206ENST00000520946 UBE2HP62256 183 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 MC2RQ01718 297 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 FOXM1Q08050 763 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 ABHD18Q0P651 414 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 NFATC2Q13469 925 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 SQSTM1Q13501 440 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 CNGA3Q16281 694 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 TCP11X2Q5H9J9 407 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 ERMARDQ5T6L9 678 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 TMCO4Q5TGY1 634 aa11.46□□□□□ -0.57
MRPS28-206ENST00000520946 DPY19L2P1Q6NXN4 242 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms