RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 L3HYPDHQ96EM0 354 aa9.96□□□□□ -0.82
SPARC-202ENST00000520687 TMA16Q96EY4 203 aaKnown RBP9.96□□□□□ -0.82
SPARC-202ENST00000520687 MYEOVQ96EZ4 313 aa9.96□□□□□ -0.82
SPARC-202ENST00000520687 CDKN2AIPNLQ96HQ2 116 aa9.96□□□□□ -0.82
SPARC-202ENST00000520687 TBATAQ96M53 351 aa9.96□□□□□ -0.82
SPARC-202ENST00000520687 RTKNQ9BST9 563 aa9.96□□□□□ -0.82
SPARC-202ENST00000520687 AARSD1Q9BTE6 412 aaKnown RBP9.96□□□□□ -0.82
SPARC-202ENST00000520687 TDRD1Q9BXT4 1180 aaKnown RBP9.96□□□□□ -0.82
SPARC-202ENST00000520687 MUC3BQ9H195 1237 aa9.96□□□□□ -0.82
SPARC-202ENST00000520687 CCDC68Q9H2F9 335 aa9.96□□□□□ -0.82
SPARC-202ENST00000520687 TFB2MQ9H5Q4 396 aaKnown RBP9.96□□□□□ -0.82
SPARC-202ENST00000520687 BCAP29Q9UHQ4 241 aa9.96□□□□□ -0.82
SPARC-202ENST00000520687 PLA2G4CQ9UP65 541 aa9.96□□□□□ -0.82
SPARC-202ENST00000520687 C15orf41Q9Y2V0 281 aa9.96□□□□□ -0.82
SPARC-202ENST00000520687 NYNRINQ9P2P1 1898 aaKnown RBP9.95□□□□□ -0.82
SPARC-202ENST00000520687 DOCK4Q8N1I0 1966 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 H0Y626 953 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 H7C0S8 307 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 CBX4O00257 560 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 GRID2O43424 1007 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 LILRB3O75022 631 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 FKBP6O75344 327 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 ZMPSTE24O75844 475 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 LUC7L3O95232 432 aaKnown RBP9.95□□□□□ -0.82
SPARC-202ENST00000520687 HDCP19113 662 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 NCF2P19878 526 aaPredicted RBP9.95□□□□□ -0.82
SPARC-202ENST00000520687 ARRB2P32121 409 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 GLRBP48167 497 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 SCNN1BP51168 640 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 ARSDP51689 593 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 CLCN4P51793 760 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 ADARP55265 1226 aaKnown RBP9.95□□□□□ -0.82
SPARC-202ENST00000520687 SLC7A9P82251 487 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 KDSRQ06136 332 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 DLG1Q12959 904 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 KLF10Q13118 480 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 CSHL1Q14406 222 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 CXorf57Q6NSI4 855 aaKnown RBP9.95□□□□□ -0.82
SPARC-202ENST00000520687 AAGABQ6PD74 315 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 NCEH1Q6PIU2 408 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 CERS6Q6ZMG9 384 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 Q6ZNB5 142 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.95□□□□□ -0.82
SPARC-202ENST00000520687 ELMOD1Q8N336 334 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 TMEM199Q8N511 208 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 NKAPQ8N5F7 415 aaKnown RBP9.95□□□□□ -0.82
SPARC-202ENST00000520687 ZNF557Q8N988 423 aaPredicted RBP9.95□□□□□ -0.82
SPARC-202ENST00000520687 DCAF4L2Q8NA75 395 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 CEP70Q8NHQ1 597 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 JADE3Q92613 823 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 MRPS31Q92665 395 aaKnown RBP9.95□□□□□ -0.82
SPARC-202ENST00000520687 RMDN1Q96DB5 314 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 PRR11Q96HE9 360 aaPredicted RBP9.95□□□□□ -0.82
SPARC-202ENST00000520687 RSRC1Q96IZ7 334 aaKnown RBP9.95□□□□□ -0.82
SPARC-202ENST00000520687 DNAJC1Q96KC8 554 aaKnown RBP9.95□□□□□ -0.82
SPARC-202ENST00000520687 TTC1Q99614 292 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 OLFM1Q99784 485 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 FEM1AQ9BSK4 669 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 C2orf49Q9BVC5 232 aaPredicted RBP9.95□□□□□ -0.82
SPARC-202ENST00000520687 RNF38Q9H0F5 515 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 POMKQ9H5K3 350 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 BATF3Q9NR55 127 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 GKN1Q9NS71 199 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 TAS2R13Q9NYV9 303 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 PRPF19Q9UMS4 504 aaKnown RBP9.95□□□□□ -0.82
SPARC-202ENST00000520687 RAI2Q9Y5P3 530 aa9.95□□□□□ -0.82
SPARC-202ENST00000520687 KMT2BQ9UMN6 2715 aaPredicted RBP9.94□□□□□ -0.82
SPARC-202ENST00000520687 REV3LO60673 3130 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.94□□□□□ -0.82
SPARC-202ENST00000520687 E2F8A0AVK6 867 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 LCHNA4D1U4 455 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 SYCE1LA8MT33 242 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 A8MUI8 341 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 ANKRD66B4E2M5 251 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 CCNT2O60583 730 aaKnown RBP9.94□□□□□ -0.82
SPARC-202ENST00000520687 NDUFS3O75489 264 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 CTSAP10619 480 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 COX4I1P13073 169 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 GNAZP19086 355 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 CDC25CP30307 473 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 CPOXP36551 454 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 CDC16Q13042 620 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 USP4Q13107 963 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 UBAP2LQ14157 1087 aaKnown RBP9.94□□□□□ -0.82
SPARC-202ENST00000520687 MAPRE2Q15555 327 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 ACCSLQ4AC99 568 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 MPPE1Q53F39 396 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 RBM20Q5T481 1227 aaKnown RBP9.94□□□□□ -0.82
SPARC-202ENST00000520687 LYPLAL1Q5VWZ2 237 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 UGT3A1Q6NUS8 523 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 C16orf89Q6UX73 402 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 HTR3DQ70Z44 454 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 GLT6D1Q7Z4J2 308 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 ULK2Q8IYT8 1036 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 LSMEM2Q8N112 164 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 CCNYL1Q8N7R7 359 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 KDM1BQ8NB78 822 aa9.94□□□□□ -0.82
SPARC-202ENST00000520687 TXNDC5Q8NBS9 432 aaKnown RBP9.94□□□□□ -0.82
SPARC-202ENST00000520687 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.94□□□□□ -0.82
SPARC-202ENST00000520687 MAELQ96JY0 434 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms