RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 STRA6Q9BX79 667 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 GLIS2Q9BZE0 524 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 MAF1Q9H063 256 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 PCDHB16Q9NRJ7 776 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 DIAPH3Q9NSV4 1193 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 ORC3Q9UBD5 711 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 AASSQ9UDR5 926 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 INTS6Q9UL03 887 aaKnown RBP3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 AAR2Q9Y312 384 aaKnown RBP3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 ARAP3Q8WWN8 1544 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 NEURL4Q96JN8 1562 aa3.37□□□□□ -1.87
HMGB1P41-201ENST00000520234 PRDM15P57071 1507 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 CLASP1Q7Z460 1538 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 DUOX2Q9NRD8 1548 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 CLEC18AA5D8T8 446 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 SMAD6O43541 496 aaKnown RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 ZNF500O60304 480 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 SERPINI2O75830 405 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 BAIAP3O94812 1187 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 SEC31AO94979 1220 aaKnown RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 DDX58O95786 925 aaKnown RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 SPARCP09486 303 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 C21orf33P30042 268 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 PCYT1AP49585 367 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 THBS3P49746 956 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 RPS3AP61247 264 aaKnown RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 TMF1P82094 1093 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 SLC20A2Q08357 652 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 GRIK3Q13003 919 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 OLIG2Q13516 323 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 DCTN2Q13561 401 aaKnown RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 FHL1Q13642 323 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 KRT24Q2M2I5 525 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 USP41Q3LFD5 358 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 C6orf141Q5SZD1 244 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 TYW3Q6IPR3 259 aaKnown RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 SHFQ7M4L6 423 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 NOXA1Q86UR1 476 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 TDRPQ86YL5 185 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 WDR63Q8IWG1 891 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 CLEC18CQ8NCF0 446 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 ARRDC2Q8TBH0 407 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 UCMAQ8WVF2 138 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 PSPC1Q8WXF1 523 aaKnown RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 ADAMTS14Q8WXS8 1223 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 GTF3C6Q969F1 213 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 TXNDC15Q96J42 360 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 MARK4Q96L34 752 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 ZNF830Q96NB3 372 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 SH3GL2Q99962 352 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 FAM110AQ9BQ89 295 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 SEZ6LQ9BYH1 1024 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 PANK3Q9H999 370 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 CISD1Q9NZ45 108 aaKnown RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 LIMA1Q9UHB6 759 aaKnown RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 FBXO9Q9UK97 447 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 ERVK-11Q9UQG0 969 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 CAPN7Q9Y6W3 813 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 PLXNC1O60486 1568 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 IBTKQ9P2D0 1353 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 TTC3P53804 2025 aa3.36□□□□□ -1.87
HMGB1P41-201ENST00000520234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 UNC13BO14795 1591 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 SAMD9LQ8IVG5 1584 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 A0A0U1RQJ8 604 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 DYTNA2CJ06 578 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 TMEM202A6NGA9 273 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 ERVV-2B6SEH9 535 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 TIMM23O14925 209 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 TGFB1I1O43294 461 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 HSPA12AO43301 675 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 PAGE4O60829 102 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 KCNJ13O60928 360 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 GAGE7O76087 117 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 SCGB1D1O95968 90 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 CH25HO95992 272 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 GAGE12FP0CL80 117 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 GAGE12GP0CL81 117 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 GAGE12IP0CL82 117 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 T-ENOLP0DO92 83 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 CDH2P19022 906 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 HNRNPH1P31943 449 aaKnown RBP3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 CCKBRP32239 447 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 PIP4K2AP48426 406 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 RXRGP48443 463 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 HTR6P50406 440 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 LTBQ06643 244 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 GOLGA8DPQ0D2H9 430 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 TMEM115Q12893 351 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 GAGE1Q13065 139 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 GAGE4Q13068 117 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 FGFBP1Q14512 234 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 DRAP1Q14919 205 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 PLCB4Q15147 1175 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 TBCEQ15813 527 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 HLFQ16534 295 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 METTL2BQ6P1Q9 378 aaKnown RBP3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 LCTLQ6UWM7 567 aa3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 ZNF517Q6ZMY9 492 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P41-201ENST00000520234 MTSS1LQ765P7 747 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms