RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 HEATR4Q86WZ0 1026 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 CCL4L1Q8NHW4 92 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 OXNAD1Q96HP4 312 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-219ENST00000518824 SUDS3Q9H7L9 328 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-219ENST00000518824 GOLGA6AQ9NYA3 693 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 NLGN3Q9NZ94 848 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 KLQ9UEF7 1012 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 GUCA1BQ9UMX6 200 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 MSRB2Q9Y3D2 182 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 NEUROG3Q9Y4Z2 214 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 ASXL3Q9C0F0 2248 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 COL27A1Q8IZC6 1860 aaPredicted RBP13.29□□□□□ -0.28
VEGFA-219ENST00000518824 ACACBO00763 2458 aa13.29□□□□□ -0.28
VEGFA-219ENST00000518824 MAP1BP46821 2468 aaKnown RBP13.29□□□□□ -0.28
VEGFA-219ENST00000518824 CEP295Q9C0D2 2601 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 FAM221BA6H8Z2 402 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 H3BM21 787 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 H7C0C1 242 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 APOC4-APOC2K7ER74 178 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 PSMD11O00231 422 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 TOR1BO14657 336 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 AURKAO14965 403 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 RFPL3O75679 317 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 APOC2P02655 101 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 ACP1P24666 158 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 PTPN7P35236 360 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 CHRNA4P43681 627 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 ATP5OP48047 213 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 GSDMDP57764 484 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 KIAA1024LP59773 190 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 COPS2P61201 443 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 CDK3Q00526 305 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 OLIG2Q13516 323 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 RAET1GQ6H3X3 334 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 CCNI2Q6ZMN8 369 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-219ENST00000518824 TMPRSS7Q7RTY8 843 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 LRRC8AQ8IWT6 810 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 OR56A4Q8NGH8 313 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 HTR3CQ8WXA8 447 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 LYSMD1Q96S90 227 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 MLPHQ9BV36 600 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-219ENST00000518824 RIOK2Q9BVS4 552 aaKnown RBP13.28□□□□□ -0.28
VEGFA-219ENST00000518824 TEX101Q9BY14 249 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 SLC13A1Q9BZW2 595 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 TMEM168Q9H0V1 697 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 WDR26Q9H7D7 661 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 KLHL8Q9P2G9 620 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-219ENST00000518824 SPASTQ9UBP0 616 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 SHOC2Q9UQ13 582 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 R3HDM2Q9Y2K5 976 aaKnown RBP13.28□□□□□ -0.28
VEGFA-219ENST00000518824 SPO11Q9Y5K1 396 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 PCYT1BQ9Y5K3 369 aaPredicted RBP13.28□□□□□ -0.28
VEGFA-219ENST00000518824 ST14Q9Y5Y6 855 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 CSNK1G3Q9Y6M4 447 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 SCN8AQ9UQD0 1980 aa13.28□□□□□ -0.28
VEGFA-219ENST00000518824 C1orf232A0A0U1RR37 186 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 FADS2P1A8MWK0 482 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 LMO7DNF2Z398 122 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 CACNB4O00305 520 aaPredicted RBP13.27□□□□□ -0.29
VEGFA-219ENST00000518824 INPP4BO15327 924 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 RASGRP1O95267 797 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 SLC4A1P02730 911 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 CEACAM5P06731 702 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 CKMT1AP12532 417 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 WNT3AP56704 352 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 EIF3EP60228 445 aaKnown RBP13.27□□□□□ -0.29
VEGFA-219ENST00000518824 RPL26P61254 145 aaKnown RBP13.27□□□□□ -0.29
VEGFA-219ENST00000518824 DAB2P98082 770 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 CDK18Q07002 472 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 SMAD1Q15797 465 aaKnown RBP13.27□□□□□ -0.29
VEGFA-219ENST00000518824 PERM1Q5SV97 790 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 GUSBP11Q6P575 273 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 UNQ6494/PRO21346Q6UXR6 183 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 BZW1Q7L1Q6 419 aaKnown RBP13.27□□□□□ -0.29
VEGFA-219ENST00000518824 PID1Q7Z2X4 250 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 SLC35F3Q8IY50 421 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 BTN2A2Q8WVV5 523 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 AP2M1Q96CW1 435 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 HES6Q96HZ4 224 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 CALR3Q96L12 384 aaKnown RBP13.27□□□□□ -0.29
VEGFA-219ENST00000518824 MRGPRX2Q96LB1 330 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 FRMD8Q9BZ67 464 aaPredicted RBP13.27□□□□□ -0.29
VEGFA-219ENST00000518824 CYP4F12Q9HCS2 524 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 SIRPGQ9P1W8 387 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 MOSPD1Q9UJG1 213 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 CNOT6Q9ULM6 557 aaKnown RBP13.27□□□□□ -0.29
VEGFA-219ENST00000518824 RPL26L1Q9UNX3 145 aaKnown RBP13.27□□□□□ -0.29
VEGFA-219ENST00000518824 TMEM98Q9Y2Y6 226 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 PLEKHM1Q9Y4G2 1056 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 RP1P56715 2156 aa13.27□□□□□ -0.29
VEGFA-219ENST00000518824 PRSS38A1L453 326 aa13.26□□□□□ -0.29
VEGFA-219ENST00000518824 NEMP2A6NFY4 417 aa13.26□□□□□ -0.29
VEGFA-219ENST00000518824 GOLGA6L6A8MZA4 724 aa13.26□□□□□ -0.29
VEGFA-219ENST00000518824 HACD1B0YJ81 288 aa13.26□□□□□ -0.29
VEGFA-219ENST00000518824 TNFP01375 233 aa13.26□□□□□ -0.29
VEGFA-219ENST00000518824 CAPNS1P04632 268 aa13.26□□□□□ -0.29
VEGFA-219ENST00000518824 HOXC4P09017 264 aaPredicted RBP13.26□□□□□ -0.29
VEGFA-219ENST00000518824 RBP3P10745 1247 aa13.26□□□□□ -0.29
VEGFA-219ENST00000518824 MYCLP1P12525 358 aaPredicted RBP13.26□□□□□ -0.29
VEGFA-219ENST00000518824 CTSEP14091 401 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms