RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 ACTR1AP61163 376 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 CTBSQ01459 385 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 NAA35Q5VZE5 725 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 C16orf46Q6P387 395 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 NOP9Q86U38 636 aaKnown RBP11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 ZNF677Q86XU0 584 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 UNC5BQ8IZJ1 945 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 ESX1Q8N693 406 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 SSC4DQ8WTU2 575 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 PATE1Q8WXA2 126 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 SLC38A3Q99624 504 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 MAGEB5Q9BZ81 275 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 CUEDC1Q9NWM3 386 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 TMEM9Q9P0T7 183 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 DACH1Q9UI36 760 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 SLC17A4Q9Y2C5 497 aa11.44□□□□□ -0.58
TRAPPC9-203ENST00000517667 ZNF106Q9H2Y7 1883 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 A0A1W2PQ67 120 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 CREB3O43889 395 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 PRAMEF11O60813 436 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 PALMO75781 387 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 DLGAP3O95886 979 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 IVLP07476 585 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 MMEP08473 750 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 MMP8P22894 467 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 TEAD1P28347 426 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 HTR7P34969 479 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 ADCY8P40145 1251 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 NDST2P52849 883 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 CDK3Q00526 305 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 NSUN2Q08J23 767 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 MAN2A1Q16706 1144 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 HIST2H2BCQ6DN03 193 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 CAPRIN2Q6IMN6 1127 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 ASB18Q6ZVZ8 466 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 TIPARPQ7Z3E1 657 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 ARHGAP22Q7Z5H3 698 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 PYROXD2Q8N2H3 581 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 PELI3Q8N2H9 469 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 EPS8L1Q8TE68 723 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 SPOCK2Q92563 424 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 COQ10AQ96MF6 247 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 CTRCQ99895 268 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 CINPQ9BW66 212 aaPredicted RBP11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 STN1Q9H668 368 aaKnown RBP11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 POLHQ9Y253 713 aa11.43□□□□□ -0.58
TRAPPC9-203ENST00000517667 ANKRD17O75179 2603 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 PRRC2CQ9Y520 2896 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 ABCA12Q86UK0 2595 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 ARHGAP42A6NI28 874 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 J3KR12 359 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 POLR1CO15160 346 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 RFPL1O75677 317 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 FUCA1P04066 466 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 KRT3P12035 628 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 GPD1P21695 349 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 RGRP47804 291 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 UQCRFS1P47985 274 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 AP1S1P61966 158 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 LRP8Q14114 963 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 RFTN1Q14699 578 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 SNAP47Q5SQN1 464 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 ATP1A1-AS1Q5TC04 95 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 PHLDB2Q86SQ0 1253 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 FAM114A1Q8IWE2 563 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 TSEN2Q8NCE0 465 aaKnown RBP11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 JOSD2Q8TAC2 188 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 C11orf70Q9BRQ4 267 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 NDST4Q9H3R1 872 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 LRRC19Q9H756 370 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 B4GALT6Q9UBX8 382 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 ST14Q9Y5Y6 855 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 FHOD1Q9Y613 1164 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 RPS6KL1Q9Y6S9 549 aa11.42□□□□□ -0.58
TRAPPC9-203ENST00000517667 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 GOLGA6CA6NDK9 693 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 GOLGA6BA6NDN3 693 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 TTLL8A6PVC2 850 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 A8MU76 341 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 A8MX80 341 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 F8VZ95 297 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 PSMD11O00231 422 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 TRAFD1O14545 582 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 INPP4BO15327 924 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 CYP1A1P04798 512 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 GOLGA6DP0CG33 693 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 NR1D1P20393 614 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 GNLYP22749 145 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 VIPR1P32241 457 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 RENBPP51606 427 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 EPHA4P54764 986 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 GSCP56915 257 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 CNGA3Q16281 694 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 KLHDC7AQ5VTJ3 777 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 RAET1GQ6H3X3 334 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 TRIM72Q6ZMU5 477 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 SFRP1Q8N474 314 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 CPT1CQ8TCG5 803 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 SLC37A2Q8TED4 501 aa11.41□□□□□ -0.58
TRAPPC9-203ENST00000517667 SH3KBP1Q96B97 665 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms