RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 CNPP09543 421 aaKnown RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 MAGP20916 626 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 BOP1Q14137 746 aaKnown RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 RBM20Q5T481 1227 aaKnown RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 KATNAL2Q8IYT4 538 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 DEPDC4Q8N2C3 294 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 GALNT6Q8NCL4 622 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 SIPA1Q96FS4 1042 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 FUBP3Q96I24 572 aaKnown RBP eCLIP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 MFSD14AQ96MC6 490 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 TMEM175Q9BSA9 504 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 PNPLA8Q9NP80 782 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 PCDHA11Q9Y5I1 949 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 FAM237AA0A1B0GTK4 181 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 SOWAHBA6NEL2 793 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 AGPSO00116 658 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 CHD2O14647 1828 aaKnown RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 TGFBR2P37173 567 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 PGS1Q32NB8 556 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 EARS2Q5JPH6 523 aaKnown RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 PMF1Q6P1K2 205 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 C16orf46Q6P387 395 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 PTAR1Q7Z6K3 402 aaPredicted RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 ALYREFQ86V81 257 aaKnown RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 GATAD2AQ86YP4 633 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 BAP1Q92560 729 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 RCN3Q96D15 328 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 DNAJC1Q96KC8 554 aaKnown RBP12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 IL22Q9GZX6 179 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 LRRC19Q9H756 370 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 ETNK2Q9NVF9 386 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 SPATA7Q9P0W8 599 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 MLXQ9UH92 298 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 SIK3Q9Y2K2 1263 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 RIPK3Q9Y572 518 aa12.26□□□□□ -0.45
PCDHGA6-201ENST00000517434 C5orf60A6NFR6 353 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 MAP3K6O95382 1288 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 CPSF4O95639 269 aaKnown RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 FAM163BP0C2L3 166 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 PAICSP22234 425 aaKnown RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 YBEYP58557 167 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 CDC42P60953 191 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 DUSP4Q13115 394 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 ARHGAP36Q6ZRI8 547 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 OTOP3Q7RTS5 596 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 PRELID2Q8N945 189 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 FNDC5Q8NAU1 212 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 WFIKKN2Q8TEU8 576 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 PHF21BQ96EK2 531 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 CFAP97Q9P2B7 532 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 SLC27A5Q9Y2P5 690 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 RGPD2P0DJD1 1756 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 COL1A1P02452 1464 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 H3BN98 237 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 PRKD3O94806 890 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 BRCC3P46736 316 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 CSNK2BP67870 215 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 GAD2Q05329 585 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 GRSF1Q12849 480 aaKnown RBP eCLIP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 C15orf59Q2T9L4 293 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 KCNT2Q6UVM3 1135 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 NKAPQ8N5F7 415 aaKnown RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 ZNF671Q8TAW3 534 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 TCF25Q9BQ70 676 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 APOL2Q9BQE5 337 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 INTS7Q9NVH2 962 aaKnown RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 GNPTGQ9UJJ9 305 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 ERGIC3Q9Y282 383 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 ROBO1Q9Y6N7 1651 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 RCCD1A6NED2 376 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 CCRL2O00421 344 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 VAPBO95292 243 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 ENO2P09104 434 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 ZNF806P0C7X5 589 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 PCNAP12004 261 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 GTF2E2P29084 291 aaKnown RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 TTPAP49638 278 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 ERVK-21P61565 698 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 RALGDSQ12967 914 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 POU6F1Q14863 301 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 RAET1GQ6H3X3 334 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 PIGWQ7Z7B1 504 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 STX12Q86Y82 276 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 RASAL3Q86YV0 1011 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 EFCAB3Q8N7B9 438 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 FBXO30Q8TB52 745 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 ADAM32Q8TC27 787 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 PNPT1Q8TCS8 783 aaKnown RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 PURBQ96QR8 312 aaKnown RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 ZNF670Q9BS34 389 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 TMEM109Q9BVC6 243 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 NMUR2Q9GZQ4 415 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 ACSS3Q9H6R3 686 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 GNB5O14775 395 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 USP12O75317 370 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 LBPP18428 481 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 RCVRNP35243 200 aa12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 CHI3L1P36222 383 aaPredicted RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 INTS6LQ5JSJ4 861 aaKnown RBP12.25□□□□□ -0.45
PCDHGA6-201ENST00000517434 ANO7Q6IWH7 933 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms