RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 ST14Q9Y5Y6 855 aa18.38■□□□□ 0.53
SPOP-220ENST00000515508 PTPN13Q12923 2485 aa18.38■□□□□ 0.53
SPOP-220ENST00000515508 IGHV5-10-1A0A0J9YXX1 117 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 TTC24A2A3L6 582 aaPredicted RBP18.37■□□□□ 0.53
SPOP-220ENST00000515508 RHPN2P1A8MT19 583 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 TERTO14746 1132 aaKnown RBP18.37■□□□□ 0.53
SPOP-220ENST00000515508 ZW10O43264 779 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 ECEL1O95672 775 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 FAM87AP0C7U9 286 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 CDK11BP21127 795 aaKnown RBP18.37■□□□□ 0.53
SPOP-220ENST00000515508 AK4P27144 223 aaPredicted RBP18.37■□□□□ 0.53
SPOP-220ENST00000515508 ETV3P41162 512 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 GPR3P46089 330 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 CSRP3P50461 194 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 DPYSL2Q16555 572 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 STX1AQ16623 288 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 AMZ1Q400G9 498 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 TMEM164Q5U3C3 297 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 NAGSQ8N159 534 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 PGBD5Q8N414 524 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 ZSCAN1Q8NBB4 408 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 PTCD2Q8WV60 388 aaKnown RBP18.37■□□□□ 0.53
SPOP-220ENST00000515508 HTR3CQ8WXA8 447 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 MCCC1Q96RQ3 725 aaPredicted RBP18.37■□□□□ 0.53
SPOP-220ENST00000515508 PHTF1Q9UMS5 762 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 PCDHGA3Q9Y5H0 932 aa18.37■□□□□ 0.53
SPOP-220ENST00000515508 ZFC3H1O60293 1989 aaKnown RBP18.37■□□□□ 0.53
SPOP-220ENST00000515508 NPIPB15A6NHN6 443 aaPredicted RBP18.36■□□□□ 0.53
SPOP-220ENST00000515508 STMND1H3BQB6 276 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 CYP2A6P11509 494 aaPredicted RBP18.36■□□□□ 0.53
SPOP-220ENST00000515508 SFTPCP11686 197 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 GZMAP12544 262 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 CCL4P13236 92 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 NFKBIAP25963 317 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 CD1CP29017 333 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 ALDH4A1P30038 563 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 GNPDA1P46926 289 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 ARSDP51689 593 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 TRAF2Q12933 501 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 TBR1Q16650 682 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 RALGPS1Q5JS13 557 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 SASS6Q6UVJ0 657 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 HSD11B1LQ7Z5J1 315 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 NAV2Q8IVL1 2488 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 RCBTB1Q8NDN9 531 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 PDCD6IPQ8WUM4 868 aaKnown RBP18.36■□□□□ 0.53
SPOP-220ENST00000515508 PATE1Q8WXA2 126 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 SCRN2Q96FV2 425 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 SCARF2Q96GP6 870 aaPredicted RBP18.36■□□□□ 0.53
SPOP-220ENST00000515508 CCDC74BQ96LY2 380 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 FUCA2Q9BTY2 467 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 SUDS3Q9H7L9 328 aaPredicted RBP18.36■□□□□ 0.53
SPOP-220ENST00000515508 NOD2Q9HC29 1040 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 SCINQ9Y6U3 715 aa18.36■□□□□ 0.53
SPOP-220ENST00000515508 LRRC53A6NM62 1247 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 H3BRJ5 948 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 MAFKO60675 156 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 IVLP07476 585 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 FGF3P11487 239 aaPredicted RBP18.35■□□□□ 0.53
SPOP-220ENST00000515508 PCK1P35558 622 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 ADCY8P40145 1251 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 LIMK2P53671 638 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 CTBSQ01459 385 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 DPTQ07507 201 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 SQSTM1Q13501 440 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 TRA2AQ13595 282 aaKnown RBP eCLIP18.35■□□□□ 0.53
SPOP-220ENST00000515508 PEX6Q13608 980 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 DENND2CQ68D51 928 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 SLC30A9Q6PML9 568 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 Q6ZVL8 140 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 OR4D9Q8NGE8 314 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 TAAR9Q96RI9 348 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 HAUS4Q9H6D7 363 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 ETNK2Q9NVF9 386 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 CNOT8Q9UFF9 292 aaKnown RBP18.35■□□□□ 0.53
SPOP-220ENST00000515508 IL17BQ9UHF5 180 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 PPIL1Q9Y3C6 166 aa18.35■□□□□ 0.53
SPOP-220ENST00000515508 PGLSO95336 258 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 SOD1P00441 154 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 FTLP02792 175 aaPredicted RBP18.34■□□□□ 0.53
SPOP-220ENST00000515508 THRAP10827 490 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 IL1R2P27930 398 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 CSF2RBP32927 897 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 ARL4AP40617 200 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 PRKCIP41743 596 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 CYP4F2P78329 520 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 E4F1Q66K89 784 aaPredicted RBP18.34■□□□□ 0.53
SPOP-220ENST00000515508 RAET1GQ6H3X3 334 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 TMCO3Q6UWJ1 677 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 ZNF571Q7Z3V5 609 aaPredicted RBP18.34■□□□□ 0.53
SPOP-220ENST00000515508 POLNQ7Z5Q5 900 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 TECPR1Q7Z6L1 1165 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 TSPAN33Q86UF1 283 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 BBS5Q8N3I7 341 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 PMEPA1Q969W9 287 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 ZNF653Q96CK0 615 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 CDH19Q9H159 772 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 FLNCQ14315 2725 aa18.34■□□□□ 0.53
SPOP-220ENST00000515508 IGHV1OR21-1A0A087WYE8 117 aa18.33■□□□□ 0.52
SPOP-220ENST00000515508 PPM1DO15297 605 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms