RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RBM15Q96T37 977 aaKnown RBP eCLIP12.77□□□□□ -0.37
CLCN3-210ENST00000515420 MLPHQ9BV36 600 aaPredicted RBP12.77□□□□□ -0.37
CLCN3-210ENST00000515420 LRRC61Q9BV99 259 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 TEX101Q9BY14 249 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 PHPT1Q9NRX4 125 aaPredicted RBP12.77□□□□□ -0.37
CLCN3-210ENST00000515420 KLK13Q9UKR3 277 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 TRHDEQ9UKU6 1024 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 PNMA8BQ9ULN7 279 aaPredicted RBP12.77□□□□□ -0.37
CLCN3-210ENST00000515420 PLXNB3Q9ULL4 1909 aa12.77□□□□□ -0.37
CLCN3-210ENST00000515420 RGSL1A5PLK6 1076 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 TMEM8BA6NDV4 472 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 NRDCO43847 1150 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 TJP3O95049 919 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 ANXA6P08133 673 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 DAB2P98082 770 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 E2F1Q01094 437 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 CDK18Q07002 472 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 DNAJC3Q13217 504 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 QPCTQ16769 361 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 ALG11Q2TAA5 492 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 C6orf132Q5T0Z8 1188 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 CCDC181Q5TID7 509 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 DENND2CQ68D51 928 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 ENPP7Q6UWV6 458 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 ZNF662Q6ZS27 426 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 HID1Q8IV36 788 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 CACTIN-AS1Q8N1I8 211 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 CCHCR1Q8TD31 782 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 GATA6Q92908 595 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 HAUS1Q96CS2 278 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 HES6Q96HZ4 224 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 APOLD1Q96LR9 279 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 CNTNAP3BQ96NU0 1288 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 BOCQ9BWV1 1114 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 HEMGNQ9BXL5 484 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 TMEM121BQ9BXQ6 578 aaPredicted RBP12.76□□□□□ -0.37
CLCN3-210ENST00000515420 CEP41Q9BYV8 373 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 CNTNAP3Q9BZ76 1288 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 CDH19Q9H159 772 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 MAGEE1Q9HCI5 957 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 TRIM10Q9UDY6 481 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 FAM153AQ9UHL3 310 aa12.76□□□□□ -0.37
CLCN3-210ENST00000515420 LY6G6EA0A0G2JKS1 128 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 C1orf232A0A0U1RR37 186 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 GOLGA6L9A6NEM1 432 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 GOLGA8CPA6NN73 597 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 GCATO75600 419 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 NDST3O95803 873 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 TNFP01375 233 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 EPOP01588 193 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 PYGMP11217 842 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 CTSEP14091 401 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 SPINK2P20155 84 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 CD68P34810 354 aaPredicted RBP12.75□□□□□ -0.37
CLCN3-210ENST00000515420 CDK3Q00526 305 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 LLGL1Q15334 1064 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 CDKN3Q16667 212 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 RAET1GQ6H3X3 334 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 CCDC70Q6NSX1 233 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 UNQ6494/PRO21346Q6UXR6 183 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 ADAMTSL4Q6UY14 1074 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 CCNI2Q6ZMN8 369 aaPredicted RBP12.75□□□□□ -0.37
CLCN3-210ENST00000515420 HEATR4Q86WZ0 1026 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 GKN2Q86XP6 184 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 CDKL3Q8IVW4 592 aaPredicted RBP12.75□□□□□ -0.37
CLCN3-210ENST00000515420 LRRC8AQ8IWT6 810 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 ZNF567Q8N184 647 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 TTC13Q8NBP0 860 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 ACTL9Q8TC94 416 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 SCG3Q8WXD2 468 aaKnown RBP12.75□□□□□ -0.37
CLCN3-210ENST00000515420 GLMNQ92990 594 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 AP2M1Q96CW1 435 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 PDXPQ96GD0 296 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 FCRL5Q96RD9 977 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 FRMD8Q9BZ67 464 aaPredicted RBP12.75□□□□□ -0.37
CLCN3-210ENST00000515420 CLPBQ9H078 707 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 TCEAL2Q9H3H9 227 aaPredicted RBP12.75□□□□□ -0.37
CLCN3-210ENST00000515420 FGF22Q9HCT0 170 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 RAD18Q9NS91 495 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 PKD2L2Q9NZM6 624 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 KLHL8Q9P2G9 620 aaPredicted RBP12.75□□□□□ -0.37
CLCN3-210ENST00000515420 NFKBIL1Q9UBC1 381 aaPredicted RBP12.75□□□□□ -0.37
CLCN3-210ENST00000515420 CAPN6Q9Y6Q1 641 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 U3KQA8 63 aa12.75□□□□□ -0.37
CLCN3-210ENST00000515420 SCN8AQ9UQD0 1980 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 A0A0U1RQJ8 604 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 PRSS38A1L453 326 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 TMEM202A6NGA9 273 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 H7C0C1 242 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 DDX3YO15523 660 aaKnown RBP12.74□□□□□ -0.37
CLCN3-210ENST00000515420 STK10O94804 968 aaKnown RBP12.74□□□□□ -0.37
CLCN3-210ENST00000515420 CLDN7O95471 211 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 FTCDO95954 541 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 MT-CYBP00156 380 aaPredicted RBP12.74□□□□□ -0.37
CLCN3-210ENST00000515420 SOD1P00441 154 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 CCDC175P0C221 793 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 NFKB1P19838 968 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 GPR1P46091 355 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 ATP5OP48047 213 aa12.74□□□□□ -0.37
CLCN3-210ENST00000515420 SPINT3P49223 89 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms