RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	COL4A3	Q01955	1670 aa		6.73	□□□□□ -1.33
HIPK1-210	ENST00000514621	HELZ	P42694	1942 aa	Known RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	GOLGA6L7	A0A1B0GV03	622 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	KANSL1L	A0AUZ9	987 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	TRDMT1	O14717	391 aa	Known RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	HOXC11	O43248	304 aa	Predicted RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	FOXS1	O43638	330 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	PI15	O43692	258 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	ACSL4	O60488	711 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	CDC14B	O60729	498 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	SRGAP2	O75044	1071 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	ENDOD1	O94919	500 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	LATS1	O95835	1130 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	MOCS2	O96007	188 aa	Predicted RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	F9	P00740	461 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	SLC2A3	P11169	496 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	TCF4	P15884	667 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	GPD1	P21695	349 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	COMT	P21964	271 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	PSMA2	P25787	234 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	PTX3	P26022	381 aa	Predicted RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	CCR1	P32246	355 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	CHKA	P35790	457 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	OPRD1	P41143	372 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	SSR1	P43307	286 aa	Known RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	PTPN9	P43378	593 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	SLC11A2	P49281	568 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	CXCR3	P49682	368 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	CLCN5	P51795	746 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	ATXN1	P54253	815 aa	Known RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	VCP	P55072	806 aa	Known RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	HADHB	P55084	474 aa	Known RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	SESN2	P58004	480 aa	Predicted RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	GAD2	Q05329	585 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	PON2	Q15165	354 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	TBR1	Q16650	682 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	CDO1	Q16878	200 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	FAM133B	Q5BKY9	247 aa	Known RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	TMEM31	Q5JXX7	168 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	PRAMEF9	Q5VWM5	478 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	ZNF585A	Q6P3V2	769 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	ZNF852	Q6ZMS4	543 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	TPGS1	Q6ZTW0	290 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	SYCE1	Q8N0S2	351 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	CPXM2	Q8N436	756 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	FAM3C	Q92520	227 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	CENPI	Q92674	756 aa	Predicted RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	KRT35	Q92764	455 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	PGAP3	Q96FM1	320 aa	Predicted RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	MSANTD3	Q96H12	275 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	BTN2A3P	Q96KV6	586 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	CAPZA3	Q96KX2	299 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	TUBGCP5	Q96RT8	1024 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	TBCB	Q99426	244 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	NELL2	Q99435	816 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	ELF4	Q99607	663 aa	Predicted RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	DPYSL5	Q9BPU6	564 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	MFSD1	Q9H3U5	465 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	FBRSL1	Q9HCM7	1045 aa	Known RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	LTB4R2	Q9NPC1	389 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	PIGV	Q9NUD9	493 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	SMARCAL1	Q9NZC9	954 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	XPO7	Q9UIA9	1087 aa	Known RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	STAP1	Q9ULZ2	295 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	TSC22D4	Q9Y3Q8	395 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	COL4A2	P08572	1712 aa		6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	KIF26A	Q9ULI4	1882 aa	Predicted RBP	6.72	□□□□□ -1.33
HIPK1-210	ENST00000514621	F5	P12259	2224 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	TMEM191C	A6NGB0	347 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	NEDD8-MDP1	E9PL57	170 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621		I6L893	689 aa	Predicted RBP	6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	MYO1F	O00160	1098 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	ZNF185	O15231	689 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	TSPAN3	O60637	253 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	PROSC	O94903	275 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	PENK	P01210	267 aa	Predicted RBP	6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	APOE	P02649	317 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	TYR	P14679	529 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	TNFRSF1A	P19438	455 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	SDC4	P31431	198 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	SLC6A4	P31645	630 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	RDX	P35241	583 aa	Known RBP	6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	RPS19	P39019	145 aa	Known RBP	6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	TAS2R40	P59535	323 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	DEUP1	Q05D60	604 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	GRSF1	Q12849	480 aa	Known RBP eCLIP	6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	UBXN2B	Q14CS0	331 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	RPS6KA1	Q15418	735 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	CDSN	Q15517	529 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	C15orf59	Q2T9L4	293 aa	Predicted RBP	6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	ANO4	Q32M45	955 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	RAB6C	Q53S08	254 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	TMEM196	Q5HYL7	178 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	TIGD7	Q6NT04	549 aa	Predicted RBP	6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	RFWD3	Q6PCD5	774 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	C1orf228	Q6PIY5	440 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	SLFN11	Q7Z7L1	901 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	NT5DC3	Q86UY8	548 aa		6.71	□□□□□ -1.34
HIPK1-210	ENST00000514621	CCDC105	Q8IYK2	499 aa		6.71	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms