RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 TEX101Q9BY14 249 aa20.29■□□□□ 0.84
SQSTM1-215ENST00000514093 FRMD8Q9BZ67 464 aaPredicted RBP20.29■□□□□ 0.84
SQSTM1-215ENST00000514093 B4GALT6Q9UBX8 382 aa20.29■□□□□ 0.84
SQSTM1-215ENST00000514093 NOCTQ9UK39 431 aaKnown RBP20.29■□□□□ 0.84
SQSTM1-215ENST00000514093 TTC24A2A3L6 582 aaPredicted RBP20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 GOLGA6CA6NDK9 693 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 GOLGA6BA6NDN3 693 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 F8VZ95 297 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 GADD45BO75293 160 aaPredicted RBP20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 PALMO75781 387 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 GOLGA6DP0CG33 693 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 UCHL3P15374 230 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 CHRNB2P17787 502 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 TCN2P20062 427 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 ACTR1BP42025 376 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 CSNK1DP48730 415 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 PAPOLAP51003 745 aaKnown RBP20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 ACTR1AP61163 376 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 POLR2LP62875 67 aaKnown RBP20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 DOK6Q6PKX4 331 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 TEX19Q8NA77 164 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 AHCYL2Q96HN2 611 aaKnown RBP20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 TEFMQ96QE5 360 aaKnown RBP20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 SLC39A8Q9C0K1 460 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 GOLGA6AQ9NYA3 693 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 FZD10Q9ULW2 581 aa20.28■□□□□ 0.84
SQSTM1-215ENST00000514093 SPTBN1Q01082 2364 aaKnown RBP20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 PES1O00541 588 aaKnown RBP20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 TRAFD1O14545 582 aaPredicted RBP20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 CCP110O43303 1012 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 GFPT2O94808 682 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 ETV3P41162 512 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 SCNN1BP51168 640 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 CDK3Q00526 305 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 MC2RQ01718 297 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 FMO1Q01740 532 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 PTP4A2Q12974 167 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 CNGA3Q16281 694 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 TPD52L1Q16890 204 aaPredicted RBP20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 DPYSL5Q9BPU6 564 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 EFHD1Q9BUP0 239 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 SELENOOQ9BVL4 669 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 STK33Q9BYT3 514 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 UNC79Q9P2D8 2635 aa20.27■□□□□ 0.84
SQSTM1-215ENST00000514093 STK17BO94768 372 aa20.26■□□□□ 0.83
SQSTM1-215ENST00000514093 AGFG2O95081 481 aa20.26■□□□□ 0.83
SQSTM1-215ENST00000514093 F8A1P23610 371 aa20.26■□□□□ 0.83
SQSTM1-215ENST00000514093 GPLD1P80108 840 aa20.26■□□□□ 0.83
SQSTM1-215ENST00000514093 CDR2Q01850 454 aa20.26■□□□□ 0.83
SQSTM1-215ENST00000514093 ABHD18Q0P651 414 aa20.26■□□□□ 0.83
SQSTM1-215ENST00000514093 ARHGAP36Q6ZRI8 547 aa20.26■□□□□ 0.83
SQSTM1-215ENST00000514093 SLC38A3Q99624 504 aa20.26■□□□□ 0.83
SQSTM1-215ENST00000514093 TUBGCP2Q9BSJ2 902 aa20.26■□□□□ 0.83
SQSTM1-215ENST00000514093 CINPQ9BW66 212 aaPredicted RBP20.26■□□□□ 0.83
SQSTM1-215ENST00000514093 PDP2Q9P2J9 529 aa20.26■□□□□ 0.83
SQSTM1-215ENST00000514093 TMEM98Q9Y2Y6 226 aa20.26■□□□□ 0.83
SQSTM1-215ENST00000514093 KCNMB2Q9Y691 235 aa20.26■□□□□ 0.83
SQSTM1-215ENST00000514093 FGF10O15520 208 aaPredicted RBP20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 ERCC5P28715 1186 aaPredicted RBP20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 NDST2P52849 883 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 TPI1P60174 286 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 MC1RQ01726 317 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 PTPRRQ15256 657 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 CAMK4Q16566 473 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 RAET1GQ6H3X3 334 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 CEACAM20Q6UY09 585 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 ARHGAP22Q7Z5H3 698 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 HSD11B1LQ7Z5J1 315 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 ZNF677Q86XU0 584 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 FNIP1Q8TF40 1166 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 PCDHB18PQ96TA0 734 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 GPATCH2LQ9NWQ4 482 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 ADAM22Q9P0K1 906 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 KLHL3Q9UH77 587 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 SLC17A4Q9Y2C5 497 aa20.25■□□□□ 0.83
SQSTM1-215ENST00000514093 ARHGAP42A6NI28 874 aa20.24■□□□□ 0.83
SQSTM1-215ENST00000514093 EML2O95834 649 aa20.24■□□□□ 0.83
SQSTM1-215ENST00000514093 GNLYP22749 145 aa20.24■□□□□ 0.83
SQSTM1-215ENST00000514093 MARK2Q7KZI7 788 aaKnown RBP20.24■□□□□ 0.83
SQSTM1-215ENST00000514093 OR10G6Q8NH81 332 aa20.24■□□□□ 0.83
SQSTM1-215ENST00000514093 SLC37A2Q8TED4 501 aa20.24■□□□□ 0.83
SQSTM1-215ENST00000514093 PDCD6IPQ8WUM4 868 aaKnown RBP20.24■□□□□ 0.83
SQSTM1-215ENST00000514093 NCSTNQ92542 709 aa20.24■□□□□ 0.83
SQSTM1-215ENST00000514093 FBXO8Q9NRD0 319 aa20.24■□□□□ 0.83
SQSTM1-215ENST00000514093 KIAA1468Q9P260 1216 aa20.24■□□□□ 0.83
SQSTM1-215ENST00000514093 TMEM184BQ9Y519 407 aaPredicted RBP20.24■□□□□ 0.83
SQSTM1-215ENST00000514093 PCDHGC4Q9Y5F7 938 aa20.24■□□□□ 0.83
SQSTM1-215ENST00000514093 A0A0U1RQS6 177 aa20.23■□□□□ 0.83
SQSTM1-215ENST00000514093 HEXIM1O94992 359 aaKnown RBP20.23■□□□□ 0.83
SQSTM1-215ENST00000514093 MAP3K6O95382 1288 aa20.23■□□□□ 0.83
SQSTM1-215ENST00000514093 IVLP07476 585 aa20.23■□□□□ 0.83
SQSTM1-215ENST00000514093 FURINP09958 794 aa20.23■□□□□ 0.83
SQSTM1-215ENST00000514093 VIPR1P32241 457 aa20.23■□□□□ 0.83
SQSTM1-215ENST00000514093 NSUN2Q08J23 767 aaKnown RBP eCLIP20.23■□□□□ 0.83
SQSTM1-215ENST00000514093 PEX6Q13608 980 aa20.23■□□□□ 0.83
SQSTM1-215ENST00000514093 ERV3-1Q14264 604 aa20.23■□□□□ 0.83
SQSTM1-215ENST00000514093 FHL5Q5TD97 284 aa20.23■□□□□ 0.83
SQSTM1-215ENST00000514093 Q6ZVL8 140 aa20.23■□□□□ 0.83
SQSTM1-215ENST00000514093 ASB18Q6ZVZ8 466 aa20.23■□□□□ 0.83
SQSTM1-215ENST00000514093 DTD2Q96FN9 168 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms