RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 XIAPP98170 497 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 TIAL1Q01085 375 aaKnown RBP eCLIP8.36□□□□□ -1.07
RNF4-220ENST00000513578 PFKPQ01813 784 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 CACNG1Q06432 222 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 RAD51Q06609 339 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 GALNT1Q10472 559 aaPredicted RBP8.36□□□□□ -1.07
RNF4-220ENST00000513578 DLG1Q12959 904 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 PEX6Q13608 980 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 ITGA9Q13797 1035 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 SEMA3AQ14563 771 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 RAB30Q15771 203 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 SMAD1Q15797 465 aaKnown RBP8.36□□□□□ -1.07
RNF4-220ENST00000513578 CARD16Q5EG05 197 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 TECRLQ5HYJ1 363 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 LY6G5CQ5SRR4 150 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 ATXN7L2Q5T6C5 722 aaPredicted RBP8.36□□□□□ -1.07
RNF4-220ENST00000513578 LYPLAL1Q5VWZ2 237 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 FAM109BQ6ICB4 259 aaPredicted RBP8.36□□□□□ -1.07
RNF4-220ENST00000513578 KLC3Q6P597 504 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 ZNF549Q6P9A3 640 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 ADGRD2Q7Z7M1 963 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 ADIPOR2Q86V24 386 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 RNF135Q8IUD6 432 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 WDR75Q8IWA0 830 aaKnown RBP8.36□□□□□ -1.07
RNF4-220ENST00000513578 KIRREL3Q8IZU9 778 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 STK40Q8N2I9 435 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 GPATCH11Q8N954 259 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 KDM1BQ8NB78 822 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 RHEBL1Q8TAI7 183 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 DTX3LQ8TDB6 740 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 PPP4R1Q8TF05 950 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 OSCP1Q8WVF1 389 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 SMG7Q92540 1137 aaKnown RBP8.36□□□□□ -1.07
RNF4-220ENST00000513578 SKA1Q96BD8 255 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 NXNL1Q96CM4 212 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 FAM122AQ96E09 287 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 LRIG1Q96JA1 1093 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 ZSWIM3Q96MP5 696 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 MCCC1Q96RQ3 725 aaPredicted RBP8.36□□□□□ -1.07
RNF4-220ENST00000513578 SORT1Q99523 831 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 TMEM120AQ9BXJ8 343 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 C20orf27Q9GZN8 174 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 DRC3Q9H069 523 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 WWP1Q9H0M0 922 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 MYLK2Q9H1R3 596 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 LINC00597Q9H2U6 94 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 SUDS3Q9H7L9 328 aaPredicted RBP8.36□□□□□ -1.07
RNF4-220ENST00000513578 TLE6Q9H808 572 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 PIDD1Q9HB75 910 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 GPAMQ9HCL2 828 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 DNAJC28Q9NX36 388 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 PLK2Q9NYY3 685 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 APPL1Q9UKG1 709 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 SLC27A6Q9Y2P4 619 aa8.36□□□□□ -1.07
RNF4-220ENST00000513578 MUC22E2RYF6 1773 aaPredicted RBP8.35□□□□□ -1.07
RNF4-220ENST00000513578 PKD1L2Q7Z442 2459 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 DOCK8Q8NF50 2099 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 PLXNA2O75051 1894 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 TRBV5-4A0A0C4DH59 114 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 OR51F1A6NGY5 319 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 AGAP14A8MT82 685 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 NEDD8-MDP1E9PL57 170 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 F8W8V4 182 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 SLCO1B7G3V0H7 640 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 ZNF195O14628 629 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 PER2O15055 1255 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 ITM2AO43736 263 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 NDUFS3O75489 264 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 ESR1P03372 595 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 F7P08709 466 aaPredicted RBP8.35□□□□□ -1.07
RNF4-220ENST00000513578 CISD3P0C7P0 127 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 PIRTP0C851 137 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 RPS3P23396 243 aaKnown RBP eCLIP8.35□□□□□ -1.07
RNF4-220ENST00000513578 PMLP29590 882 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 MC4RP32245 332 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 PPARGP37231 505 aaPredicted RBP8.35□□□□□ -1.07
RNF4-220ENST00000513578 ABL2P42684 1182 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 PTGER3P43115 390 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 MAGEA10P43363 369 aaPredicted RBP8.35□□□□□ -1.07
RNF4-220ENST00000513578 CDKN2DP55273 166 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 ATP6V0D1P61421 351 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 NAA20P61599 178 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 IRX4P78413 519 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 NFKB2Q00653 900 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 ECT2LQ008S8 904 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 OVGP1Q12889 678 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 PTPRCAPQ14761 206 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 KRT72Q14CN4 511 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 DHCR24Q15392 516 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 TBCCQ15814 346 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 SPRED3Q2MJR0 410 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 EML3Q32P44 896 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 GPR33Q49SQ1 333 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 HSF5Q4G112 596 aaPredicted RBP8.35□□□□□ -1.07
RNF4-220ENST00000513578 ZDHHC20Q5W0Z9 365 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 TPRG1Q6ZUI0 275 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 GPR149Q86SP6 731 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 CAMK1DQ8IU85 385 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 SLC22A9Q8IVM8 553 aa8.35□□□□□ -1.07
RNF4-220ENST00000513578 RAVER1Q8IY67 606 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms