RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 GTPBP4Q9BZE4 634 aaKnown RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 ING2Q9H160 280 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 ACTL8Q9H568 366 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 AKIRIN1Q9H9L7 192 aaPredicted RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 CARS2Q9HA77 564 aaKnown RBP9.12□□□□□ -0.95
NUP54-211ENST00000512151 ARHGEF38Q9NXL2 777 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 KLHL3Q9UH77 587 aa9.12□□□□□ -0.95
NUP54-211ENST00000512151 TRBV23OR9-2A0A075B6M9 112 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 HEATR9A2RTY3 570 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 PSMA7O14818 248 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 ZW10O43264 779 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 RECKO95980 971 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 CEACAM5P06731 702 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 HOXC4P09017 264 aaPredicted RBP9.11□□□□□ -0.95
NUP54-211ENST00000512151 ITGA3P26006 1051 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 CASP14P31944 242 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 TRIM23P36406 574 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 PPP1R2P41236 205 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 SNRPD1P62314 119 aaKnown RBP9.11□□□□□ -0.95
NUP54-211ENST00000512151 GPLD1P80108 840 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 PTK2Q05397 1052 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 PAK1Q13153 545 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 BIRC2Q13490 618 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 STIM1Q13586 685 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 LAMB3Q13751 1172 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 IQCB1Q15051 598 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 CHRNA6Q15825 494 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 UGT8Q16880 541 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 EFHC1Q5JVL4 640 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 WDR74Q6RFH5 385 aaPredicted RBP9.11□□□□□ -0.95
NUP54-211ENST00000512151 ZNF783Q6ZMS7 281 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 ZSWIM9Q86XI8 627 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 DRC7Q8IY82 874 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 ZNF295-AS1Q8N0V1 137 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 STK32AQ8WU08 396 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 HMCESQ96FZ2 354 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 ELMO2Q96JJ3 720 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 BARD1Q99728 777 aaKnown RBP9.11□□□□□ -0.95
NUP54-211ENST00000512151 GSDMCQ9BYG8 508 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 TRIM8Q9BZR9 551 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 ZMYND15Q9H091 742 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 TKTL2Q9H0I9 626 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 ACSS2Q9NR19 701 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 NDFIP2Q9NV92 336 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 RWDD2AQ9UIY3 292 aa9.11□□□□□ -0.95
NUP54-211ENST00000512151 ZGRF1Q86YA3 2104 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 TEX33O43247 280 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 BUB1BO60566 1050 aaPredicted RBP9.1□□□□□ -0.95
NUP54-211ENST00000512151 RECQL5O94762 991 aaPredicted RBP9.1□□□□□ -0.95
NUP54-211ENST00000512151 PIGNO95427 931 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 EML2O95834 649 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 TBXAS1P24557 533 aaPredicted RBP9.1□□□□□ -0.95
NUP54-211ENST00000512151 ERCC5P28715 1186 aaPredicted RBP9.1□□□□□ -0.95
NUP54-211ENST00000512151 MMP12P39900 470 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 PTGIRP43119 386 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 GNPDA1P46926 289 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 CXCR3P49682 368 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 SH3BP2P78314 561 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 CTBSQ01459 385 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 LRRC63Q05C16 580 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 FOXM1Q08050 763 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 ELP6Q0PNE2 266 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 ILF3Q12906 894 aaKnown RBP eCLIP9.1□□□□□ -0.955e-6■■□□□ 11.7
NUP54-211ENST00000512151 RALGDSQ12967 914 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 RAPGEF1Q13905 1077 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 CT47A1Q5JQC4 288 aaPredicted RBP9.1□□□□□ -0.95
NUP54-211ENST00000512151 MIIPQ5JXC2 388 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 ENOX1Q8TC92 643 aaKnown RBP9.1□□□□□ -0.95
NUP54-211ENST00000512151 NCSTNQ92542 709 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 INPP5DQ92835 1189 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 STAMBPL1Q96FJ0 436 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 AHCYL2Q96HN2 611 aaKnown RBP9.1□□□□□ -0.95
NUP54-211ENST00000512151 BPIFA3Q9BQP9 254 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 HSD3B7Q9H2F3 369 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 RUBCNLQ9H714 662 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 CBX8Q9HC52 389 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 OSGIN2Q9Y236 505 aa9.1□□□□□ -0.95
NUP54-211ENST00000512151 ACANP16112 2415 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 TSPAN11A1L157 253 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 SRGAP2O75044 1071 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 NDUFA10O95299 355 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 TIAF1O95411 115 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 KELP23276 732 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 PTGER4P35408 488 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 POLD2P49005 469 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 ZNF165P49910 485 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 PDCLQ13371 301 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 ELOAQ14241 798 aaKnown RBP9.09□□□□□ -0.95
NUP54-211ENST00000512151 POLD3Q15054 466 aaPredicted RBP9.09□□□□□ -0.95
NUP54-211ENST00000512151 UGP2Q16851 508 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 TSR1Q2NL82 804 aaKnown RBP9.09□□□□□ -0.95
NUP54-211ENST00000512151 HSP90AA4PQ58FG1 418 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.09□□□□□ -0.95
NUP54-211ENST00000512151 FAM199XQ6PEV8 388 aaPredicted RBP9.09□□□□□ -0.95
NUP54-211ENST00000512151 FAM183BPQ6ZVS7 135 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 RHOT1Q8IXI2 618 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 IQCKQ8N0W5 287 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 AOPEPQ8N6M6 819 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 OR10G6Q8NH81 332 aa9.09□□□□□ -0.95
NUP54-211ENST00000512151 SLC37A2Q8TED4 501 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms