RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 CFAP57Q96MR6 1250 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 TEX101Q9BY14 249 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 LHX3Q9UBR4 397 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 ERRFI1Q9UJM3 462 aaPredicted RBP11.54□□□□□ -0.56
RNF4-216ENST00000511859 TMEM59LQ9UK28 342 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 CROTQ9UKG9 612 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 SUFUQ9UMX1 484 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 PCDHGA9Q9Y5G4 932 aaKnown RBP11.54□□□□□ -0.56
RNF4-216ENST00000511859 PCDHGA6Q9Y5G7 932 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 ST14Q9Y5Y6 855 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 ZNF106Q9H2Y7 1883 aaKnown RBP11.54□□□□□ -0.56
RNF4-216ENST00000511859 PIPSLA2A3N6 862 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 CDC14CA4D256 554 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 KATNA1O75449 491 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 PLEKP08567 350 aaPredicted RBP11.54□□□□□ -0.56
RNF4-216ENST00000511859 CDH5P33151 784 aaPredicted RBP11.54□□□□□ -0.56
RNF4-216ENST00000511859 ADCY8P40145 1251 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 CSNK1DP48730 415 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 PGDP52209 483 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 RALGDSQ12967 914 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 MRPL49Q13405 166 aaKnown RBP11.54□□□□□ -0.56
RNF4-216ENST00000511859 ACOX1Q15067 660 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 GJB7Q6PEY0 223 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 SLC47A2Q86VL8 602 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 ZSWIM9Q86XI8 627 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 CAMK1DQ8IU85 385 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 FMR1NBQ8N0W7 255 aaPredicted RBP11.54□□□□□ -0.56
RNF4-216ENST00000511859 NETO2Q8NC67 525 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 SEC14L1Q92503 715 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 NCSTNQ92542 709 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 EXOC2Q96KP1 924 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 SLC25A23Q9BV35 468 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 FRMD8Q9BZ67 464 aaPredicted RBP11.54□□□□□ -0.56
RNF4-216ENST00000511859 ULBP3Q9BZM4 244 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 TWSG1Q9GZX9 223 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 ATP13A3Q9H7F0 1226 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 SUDS3Q9H7L9 328 aaPredicted RBP11.54□□□□□ -0.56
RNF4-216ENST00000511859 MLXIPLQ9NP71 852 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 APEX2Q9UBZ4 518 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 SLC17A4Q9Y2C5 497 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 PCDHGB7Q9Y5F8 929 aa11.54□□□□□ -0.56
RNF4-216ENST00000511859 MED13LQ71F56 2210 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 AKAP9Q99996 3911 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 BICDL2A1A5D9 508 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 FAM72CH0Y354 149 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 LRCH4O75427 683 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 IVLP07476 585 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 CCNYL3P0C7X3 344 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 GM2AP17900 193 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 SERPINA4P29622 427 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 ACTR1BP42025 376 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 LEPRP48357 1165 aaKnown RBP11.53□□□□□ -0.56
RNF4-216ENST00000511859 NDST2P52849 883 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 BPIFB4P59827 614 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 ACTR1AP61163 376 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 ATP11AP98196 1134 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 PARP15Q460N3 678 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.53□□□□□ -0.56
RNF4-216ENST00000511859 FAM72AQ5TYM5 149 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 PAPD7Q5XG87 772 aaKnown RBP11.53□□□□□ -0.56
RNF4-216ENST00000511859 FAM72DQ6L9T8 149 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 TRNP1Q6NT89 227 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 TTI2Q6NXR4 508 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 DPPA4Q7L190 304 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 FAM72BQ86X60 149 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 PELI3Q8N2H9 469 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 SFRP1Q8N474 314 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 TTC13Q8NBP0 860 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 THAP4Q8WY91 577 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 SMARCE1Q969G3 411 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 SH3KBP1Q96B97 665 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 ECHDC3Q96DC8 303 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 SCARF2Q96GP6 870 aaPredicted RBP11.53□□□□□ -0.56
RNF4-216ENST00000511859 C5orf34Q96MH7 638 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 KLC2Q9H0B6 622 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 PDCL3Q9H2J4 239 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 EPB41L1Q9H4G0 881 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 NOL6Q9H6R4 1146 aaKnown RBP11.53□□□□□ -0.56
RNF4-216ENST00000511859 PLCB1Q9NQ66 1216 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 NEU3Q9UQ49 428 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 SLC5A6Q9Y289 635 aa11.53□□□□□ -0.56
RNF4-216ENST00000511859 DNAJB5O75953 348 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 SLC9A1P19634 815 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 TEAD1P28347 426 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 CLCN1P35523 988 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 EPHA4P54764 986 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 CDK3Q00526 305 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 IL11RAQ14626 422 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 NAA30Q147X3 362 aaPredicted RBP11.52□□□□□ -0.57
RNF4-216ENST00000511859 TMEM135Q86UB9 458 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 HPS6Q86YV9 775 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 RTL3Q8N8U3 475 aaKnown RBP11.52□□□□□ -0.57
RNF4-216ENST00000511859 GALNT6Q8NCL4 622 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 MSANTD4Q8NCY6 345 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 SLC37A2Q8TED4 501 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 NUS1Q96E22 293 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 STAMBPL1Q96FJ0 436 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 TCTN2Q96GX1 697 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 COQ10AQ96MF6 247 aa11.52□□□□□ -0.57
RNF4-216ENST00000511859 CRACR2AQ9BSW2 395 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms