RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 GRK6P43250 576 aa5.72□□□□□ -1.49
GYPB-212ENST00000511198 ACADVLP49748 655 aa5.72□□□□□ -1.49
GYPB-212ENST00000511198 EPHB1P54762 984 aa5.72□□□□□ -1.49
GYPB-212ENST00000511198 BYSLQ13895 437 aaKnown RBP5.72□□□□□ -1.49
GYPB-212ENST00000511198 PCID2Q5JVF3 399 aa5.72□□□□□ -1.49
GYPB-212ENST00000511198 GPATCH4Q5T3I0 446 aaKnown RBP5.72□□□□□ -1.49
GYPB-212ENST00000511198 CAPRIN2Q6IMN6 1127 aaKnown RBP5.72□□□□□ -1.49
GYPB-212ENST00000511198 SPNS3Q6ZMD2 512 aa5.72□□□□□ -1.49
GYPB-212ENST00000511198 GLCCI1Q86VQ1 547 aa5.72□□□□□ -1.49
GYPB-212ENST00000511198 RP9Q8TA86 221 aaKnown RBP5.72□□□□□ -1.49
GYPB-212ENST00000511198 R3HDM4Q96D70 268 aa5.72□□□□□ -1.49
GYPB-212ENST00000511198 SLC29A3Q9BZD2 475 aa5.72□□□□□ -1.49
GYPB-212ENST00000511198 UNKQ9C0B0 810 aaKnown RBP5.72□□□□□ -1.49
GYPB-212ENST00000511198 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.72□□□□□ -1.49
GYPB-212ENST00000511198 OBP2AQ9NY56 170 aa5.72□□□□□ -1.49
GYPB-212ENST00000511198 ZIM2Q9NZV7 527 aa5.72□□□□□ -1.49
GYPB-212ENST00000511198 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.72□□□□□ -1.49
GYPB-212ENST00000511198 SLC9A2Q9UBY0 812 aa5.72□□□□□ -1.49
GYPB-212ENST00000511198 NOL7Q9UMY1 257 aaKnown RBP5.72□□□□□ -1.49
GYPB-212ENST00000511198 RP1L1Q8IWN7 2480 aaPredicted RBP5.72□□□□□ -1.49
GYPB-212ENST00000511198 UBE4BO95155 1302 aa5.72□□□□□ -1.49
GYPB-212ENST00000511198 MAP1AP78559 2803 aaPredicted RBP5.71□□□□□ -1.49
GYPB-212ENST00000511198 TMEM131Q92545 1883 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 GPAA1O43292 621 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 FAM155BO75949 473 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 TJP3O95049 919 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 BAG4O95429 457 aaKnown RBP5.71□□□□□ -1.5
GYPB-212ENST00000511198 SLC3A2P08195 630 aaKnown RBP5.71□□□□□ -1.5
GYPB-212ENST00000511198 IFIT2P09913 472 aaKnown RBP5.71□□□□□ -1.5
GYPB-212ENST00000511198 GNSP15586 552 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 SLC26A2P50443 739 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 PDE1AP54750 535 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 CYP4F2P78329 520 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 CTBP1Q13363 440 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 KDM7AQ6ZMT4 941 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 PARS2Q7L3T8 475 aaKnown RBP5.71□□□□□ -1.5
GYPB-212ENST00000511198 OVCH2Q7RTZ1 564 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 RAVER1Q8IY67 606 aaKnown RBP5.71□□□□□ -1.5
GYPB-212ENST00000511198 SMAP1Q8IYB5 467 aaPredicted RBP5.71□□□□□ -1.5
GYPB-212ENST00000511198 TCEAL8Q8IYN2 117 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 ZCCHC9Q8N567 271 aaKnown RBP5.71□□□□□ -1.5
GYPB-212ENST00000511198 TMEM57Q8N5G2 664 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 SLC15A4Q8N697 577 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 ALLCQ8N6M5 410 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 ZBTB34Q8NCN2 500 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 ZNF461Q8TAF7 563 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 DNASE2BQ8WZ79 361 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 ARHGAP45Q92619 1136 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 CD101Q93033 1021 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 MACROD1Q9BQ69 325 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 BOLA2Q9H3K6 86 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 SMURF2Q9HAU4 748 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 BCCIPQ9P287 314 aaKnown RBP eCLIP5.71□□□□□ -1.5
GYPB-212ENST00000511198 MTRRQ9UBK8 725 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 ANAPC2Q9UJX6 822 aa5.71□□□□□ -1.5
GYPB-212ENST00000511198 TDRD15B5MCY1 1934 aaKnown RBP5.71□□□□□ -1.5
GYPB-212ENST00000511198 SF3B1O75533 1304 aaKnown RBP eCLIP5.71□□□□□ -1.52e-6■■■■■ 43.1
GYPB-212ENST00000511198 NUP210Q8TEM1 1887 aaPredicted RBP5.71□□□□□ -1.5
GYPB-212ENST00000511198 CSPG4Q6UVK1 2322 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 MYO1CO00159 1063 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 MYO1FO00160 1098 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 BTN3A1O00481 513 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 PRRG1O14668 218 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 TUSC2O75896 110 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 DDAH2O95865 285 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 MBD3O95983 291 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 CCNE2O96020 404 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 KITP10721 976 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 MLH1P40692 756 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 MCM2P49736 904 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 PDE6CP51160 858 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 ZNF81P51508 661 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 ROR1Q01973 937 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 SRSF6Q13247 344 aaKnown RBP5.7□□□□□ -1.5
GYPB-212ENST00000511198 DRP2Q13474 957 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 SRSF7Q16629 238 aaKnown RBP eCLIP5.7□□□□□ -1.5
GYPB-212ENST00000511198 ZSCAN23Q3MJ62 389 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 ANO6Q4KMQ2 910 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 DEPDC1Q5TB30 811 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 PRAMEF17Q5VTA0 474 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 SASS6Q6UVJ0 657 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 IL27RAQ6UWB1 636 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 NPNTQ6UXI9 565 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 Q6ZWC4 215 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 TRMT1LQ7Z2T5 733 aaKnown RBP5.7□□□□□ -1.5
GYPB-212ENST00000511198 CCDC60Q8IWA6 550 aaPredicted RBP5.7□□□□□ -1.5
GYPB-212ENST00000511198 SFTPA1Q8IWL2 248 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 SLC15A3Q8IY34 581 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 LSMEM2Q8N112 164 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 IL17RCQ8NAC3 791 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 SCARB1Q8WTV0 552 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 RFFLQ8WZ73 363 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 SGF29Q96ES7 293 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 CCNL2Q96S94 520 aaPredicted RBP5.7□□□□□ -1.5
GYPB-212ENST00000511198 THAP7Q9BT49 309 aaPredicted RBP5.7□□□□□ -1.5
GYPB-212ENST00000511198 LRRCC1Q9C099 1032 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 IL1RAPL2Q9NP60 686 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 ZDHHC4Q9NPG8 344 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 CD93Q9NPY3 652 aa5.7□□□□□ -1.5
GYPB-212ENST00000511198 TPCN1Q9ULQ1 816 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms