RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 SP110Q9HB58 689 aa15.9■□□□□ 0.14
RAB40C-202ENST00000509637 OCIAD1Q9NX40 245 aa15.9■□□□□ 0.14
RAB40C-202ENST00000509637 TMEM98Q9Y2Y6 226 aa15.9■□□□□ 0.14
RAB40C-202ENST00000509637 A0A1W2PQC6 194 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 CPNE6O95741 557 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 ITGB2P05107 769 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 CTPS1P17812 591 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 VIPR1P32241 457 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 ADCY8P40145 1251 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 GNPDA1P46926 289 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 HCAR3P49019 387 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 CSRP3P50461 194 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 AP1S1P61966 158 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 SLC30A9Q6PML9 568 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 TRIM74Q86UV6 250 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 PIM3Q86V86 326 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 ZNF761Q86XN6 746 aaPredicted RBP15.89■□□□□ 0.13
RAB40C-202ENST00000509637 PIH1D2Q8WWB5 315 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 SCARF2Q96GP6 870 aaPredicted RBP15.89■□□□□ 0.13
RAB40C-202ENST00000509637 CMKLR1Q99788 373 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 SPRY4Q9C004 299 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 SLC17A4Q9Y2C5 497 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 B3GALT1Q9Y5Z6 326 aa15.89■□□□□ 0.13
RAB40C-202ENST00000509637 SPTA1P02549 2419 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 TRBV23OR9-2A0A075B6M9 112 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 IGHV1OR21-1A0A087WYE8 117 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 FERP16591 822 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 KELP23276 732 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 LIMK2P53671 638 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 RFTN1Q14699 578 aaPredicted RBP15.88■□□□□ 0.13
RAB40C-202ENST00000509637 MAP9Q49MG5 647 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 TMCO4Q5TGY1 634 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 POLNQ7Z5Q5 900 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 CPNE8Q86YQ8 564 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 SCAMP4Q969E2 229 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 NUDCD1Q96RS6 583 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 WDR24Q96S15 920 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 SEMA3CQ99985 751 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 MGME1Q9BQP7 344 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 ABCG8Q9H221 673 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 PARVAQ9NVD7 372 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 TRNAU1APQ9NX07 287 aaKnown RBP15.88■□□□□ 0.13
RAB40C-202ENST00000509637 SEPT3Q9UH03 358 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 CD84Q9UIB8 345 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 PPIL1Q9Y3C6 166 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 NAV2Q8IVL1 2488 aa15.88■□□□□ 0.13
RAB40C-202ENST00000509637 ANKRD62A6NC57 917 aa15.87■□□□□ 0.13
RAB40C-202ENST00000509637 LRRC53A6NM62 1247 aa15.87■□□□□ 0.13
RAB40C-202ENST00000509637 DAPK3O43293 454 aa15.87■□□□□ 0.13
RAB40C-202ENST00000509637 FZD6O60353 706 aa15.87■□□□□ 0.13
RAB40C-202ENST00000509637 PGLSO95336 258 aa15.87■□□□□ 0.13
RAB40C-202ENST00000509637 FTLP02792 175 aaPredicted RBP15.87■□□□□ 0.13
RAB40C-202ENST00000509637 IL4RP24394 825 aa15.87■□□□□ 0.13
RAB40C-202ENST00000509637 POLR2LP62875 67 aaKnown RBP15.87■□□□□ 0.13
RAB40C-202ENST00000509637 SRSF1Q07955 248 aaKnown RBP eCLIP15.87■□□□□ 0.13
RAB40C-202ENST00000509637 SQSTM1Q13501 440 aa15.87■□□□□ 0.13
RAB40C-202ENST00000509637 SMTNL2Q2TAL5 461 aa15.87■□□□□ 0.13
RAB40C-202ENST00000509637 BMPERQ8N8U9 685 aa15.87■□□□□ 0.13
RAB40C-202ENST00000509637 PDCD6IPQ8WUM4 868 aaKnown RBP15.87■□□□□ 0.13
RAB40C-202ENST00000509637 LRRN4Q8WUT4 740 aa15.87■□□□□ 0.13
RAB40C-202ENST00000509637 TMEM159Q96B96 161 aa15.87■□□□□ 0.13
RAB40C-202ENST00000509637 MCCC1Q96RQ3 725 aaPredicted RBP15.87■□□□□ 0.13
RAB40C-202ENST00000509637 HAUS4Q9H6D7 363 aa15.87■□□□□ 0.13
RAB40C-202ENST00000509637 DOPEY2Q9Y3R5 2298 aa15.87■□□□□ 0.13
RAB40C-202ENST00000509637 MAST4O15021 2626 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 RHPN2P1A8MT19 583 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 EIF3CLB5ME19 914 aaKnown RBP15.86■□□□□ 0.13
RAB40C-202ENST00000509637 CPP00450 1065 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 PRLP01236 227 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 IVLP07476 585 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 RARAP10276 462 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 THRAP10827 490 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 SKILP12757 684 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 LIFP15018 202 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 UGT1A3P35503 534 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 MYL5Q02045 173 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 PTSQ03393 145 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 DPYSL2Q16555 572 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 DOK6Q6PKX4 331 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 ART4Q93070 314 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 SCRN2Q96FV2 425 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 BTBD6Q96KE9 485 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 ZNF599Q96NL3 588 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 CSPG4P5Q96PW8 444 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 TAAR9Q96RI9 348 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 EIF3CQ99613 913 aaKnown RBP15.86■□□□□ 0.13
RAB40C-202ENST00000509637 GSDMCQ9BYG8 508 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 FAM117AQ9C073 453 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 B3GNT4Q9C0J1 378 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 PHPT1Q9NRX4 125 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-202ENST00000509637 GEMIN8Q9NWZ8 242 aaKnown RBP15.86■□□□□ 0.13
RAB40C-202ENST00000509637 CNOT8Q9UFF9 292 aaKnown RBP15.86■□□□□ 0.13
RAB40C-202ENST00000509637 CNOT6Q9ULM6 557 aaKnown RBP15.86■□□□□ 0.13
RAB40C-202ENST00000509637 PHTF1Q9UMS5 762 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 PCDHGA3Q9Y5H0 932 aa15.86■□□□□ 0.13
RAB40C-202ENST00000509637 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.85■□□□□ 0.13
RAB40C-202ENST00000509637 PRPSAP2O60256 369 aa15.85■□□□□ 0.13
RAB40C-202ENST00000509637 SOCS5O75159 536 aa15.85■□□□□ 0.13
RAB40C-202ENST00000509637 RENBPP51606 427 aa15.85■□□□□ 0.13
RAB40C-202ENST00000509637 MMRN1Q13201 1228 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms