RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SH3BP2P78314 561 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 RING1Q06587 406 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 PTPRCAPQ14761 206 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 UGT3A2Q3SY77 523 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 CCSAPQ6IQ19 270 aaPredicted RBP17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 CYHR1Q6ZMK1 362 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 SATL1Q86VE3 508 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 SNX31Q8N9S9 440 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 OR9I1Q8NGQ6 314 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 ZNF599Q96NL3 588 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 EFHD1Q9BUP0 239 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 ARHGAP39Q9C0H5 1083 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 EPB41L1Q9H4G0 881 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 TFB2MQ9H5Q4 396 aaKnown RBP17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 AKTIPQ9H8T0 292 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 FBRSL1Q9HCM7 1045 aaKnown RBP17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 MID1IP1Q9NPA3 183 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 POLR3BQ9NW08 1133 aaPredicted RBP17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 CD300AQ9UGN4 299 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 LZTS1Q9Y250 596 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 AZIN1O14977 448 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 SOAT2O75908 522 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 PGM3O95394 542 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 FAM58BPP0C7Q3 252 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 GFAPP14136 432 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 RPL5P46777 297 aaKnown RBP17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 KPNA1P52294 538 aaPredicted RBP17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 SH3BGRP55822 239 aaPredicted RBP17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 PFKFB4Q16877 469 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 C6orf52Q5T4I8 152 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 NAT14Q8WUY8 206 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 C3orf30Q96M34 536 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 SYTL2Q9HCH5 934 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 PLK2Q9NYY3 685 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 DNAJC15Q9Y5T4 150 aa17.92■□□□□ 0.46
CCHCR1-228ENST00000509552 F5H5T6 163 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 H0YJX3 145 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 UBXN8O00124 270 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 MUSKO15146 869 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 CDK14O94921 469 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 PIRTP0C851 137 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 SMIM18P0DKX4 95 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 TACR2P21452 398 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 CST5P28325 142 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 STC1P52823 247 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 SEMA3AQ14563 771 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 MGAT5BQ3V5L5 792 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 FAM171A1Q5VUB5 890 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 ZFRQ96KR1 1074 aaKnown RBP17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 SEPT5Q99719 369 aaPredicted RBP17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 AARSD1Q9BTE6 412 aaKnown RBP17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 MRPS26Q9BYN8 205 aaKnown RBP17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 INTS10Q9NVR2 710 aaKnown RBP17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 SLC27A5Q9Y2P5 690 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 CENPFP49454 3210 aa17.91■□□□□ 0.46
CCHCR1-228ENST00000509552 SIX3O95343 332 aaPredicted RBP17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 NDST3O95803 873 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 ALDOCP09972 364 aaKnown RBP17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 CKBP12277 381 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 GPX3P22352 226 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 CCND3P30281 292 aaPredicted RBP17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 SLC7A1P30825 629 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 TIAL1Q01085 375 aaKnown RBP eCLIP17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 DYNC1I2Q13409 638 aaKnown RBP17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 OR4D1Q15615 310 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 C8orf82Q6P1X6 216 aaPredicted RBP17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 TWIST2Q8WVJ9 160 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 DUS3LQ96G46 650 aaKnown RBP17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 CCDC68Q9H2F9 335 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 ZNF696Q9H7X3 374 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 A0A0J9YYE9 177 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 TCRBV3S1A0A5B6 114 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 SLC7A2P52569 658 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 FAM189BP81408 668 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 CDKL1Q00532 357 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 RBBP5Q15291 538 aaKnown RBP17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 CYP2R1Q6VVX0 501 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 DHFR2Q86XF0 187 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 HERC6Q8IVU3 1022 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 DDIASQ8IXT1 998 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 LGI2Q8N0V4 545 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 MIER2Q8N344 545 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 STAG3L4Q8TBR4 150 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 LRTOMTQ8WZ04 291 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 SEMA6AQ9H2E6 1030 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 APPL1Q9UKG1 709 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 NDUFAF1Q9Y375 327 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 SNX13Q9Y5W8 968 aa17.9■□□□□ 0.46
CCHCR1-228ENST00000509552 UBA6A0AVT1 1052 aaPredicted RBP17.89■□□□□ 0.46
CCHCR1-228ENST00000509552 PIP5K1BO14986 540 aa17.89■□□□□ 0.46
CCHCR1-228ENST00000509552 RHOBTB1O94844 696 aa17.89■□□□□ 0.46
CCHCR1-228ENST00000509552 ZNF26P17031 533 aaPredicted RBP17.89■□□□□ 0.46
CCHCR1-228ENST00000509552 SREBF2Q12772 1141 aa17.89■□□□□ 0.46
CCHCR1-228ENST00000509552 TYSND1Q2T9J0 566 aa17.89■□□□□ 0.46
CCHCR1-228ENST00000509552 NADSYN1Q6IA69 706 aa17.89■□□□□ 0.46
CCHCR1-228ENST00000509552 FUNDC1Q8IVP5 155 aa17.89■□□□□ 0.46
CCHCR1-228ENST00000509552 CDKN2AIPNLQ96HQ2 116 aa17.89■□□□□ 0.46
CCHCR1-228ENST00000509552 SPATA17Q96L03 361 aa17.89■□□□□ 0.46
CCHCR1-228ENST00000509552 ATOH8Q96SQ7 321 aa17.89■□□□□ 0.46
CCHCR1-228ENST00000509552 HOPXQ9BPY8 73 aaPredicted RBP17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms