RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 MARCH9Q86YJ5 346 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 HID1Q8IV36 788 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 NDUFAF2Q8N183 169 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 FAM71DQ8N9W8 422 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 ZNF548Q8NEK5 533 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 OR4C6Q8NH72 309 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 ATL2Q8NHH9 583 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 PIH1D2Q8WWB5 315 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 HTR3CQ8WXA8 447 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 EID2BQ96D98 161 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 IMP4Q96G21 291 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 DUSP23Q9BVJ7 150 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 AP1M1Q9BXS5 423 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 TDRD1Q9BXT4 1180 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 ABCG4Q9H172 646 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 CCDC86Q9H6F5 360 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 GLOD4Q9HC38 313 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 NLGN3Q9NZ94 848 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 UBP1Q9NZI7 540 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 SPASTQ9UBP0 616 aa8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 APOBEC3BQ9UH17 382 aaKnown RBP8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 TTC7AQ9ULT0 858 aaPredicted RBP8.76□□□□□ -1.01
PDLIM5-213ENST00000509357 FRYQ5TBA9 3013 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 CPED1A4D0V7 1026 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 GOLGA6CA6NDK9 693 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 GOLGA6BA6NDN3 693 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 NPIPB15A6NHN6 443 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 HACD1B0YJ81 288 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 K7ESM1 405 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 CACNB4O00305 520 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 TOR1BO14657 336 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 PPP1R12AO14974 1030 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 KCNN4O15554 427 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 KIF5CO60282 957 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 SOCS5O75159 536 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 RECQL5O94762 991 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 PGLSO95336 258 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 ANXA6P08133 673 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 ALPIP09923 528 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 GOLGA6DP0CG33 693 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 CYP2A6P11509 494 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 MYF5P13349 255 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 PSMB4P28070 264 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 CHRNA4P43681 627 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 ACADVLP49748 655 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 BLKP51451 505 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 EPHB1P54762 984 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 CLDN6P56747 220 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 E2F1Q01094 437 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 EIF2B5Q13144 721 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 ILKQ13418 452 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 C1orf61Q13536 156 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 ARHGEF7Q14155 803 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 TCEA2Q15560 299 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 SMAD1Q15797 465 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 CYP1B1Q16678 543 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 WSCD2Q2TBF2 565 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 DEFB133Q30KQ1 61 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 PROX2Q3B8N5 592 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 ANKRD20A2Q5SQ80 823 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 TPRG1LQ5T0D9 272 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 ARMC12Q5T9G4 340 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 SEL1L2Q5TEA6 688 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 ANKRD20A1Q5TYW2 823 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 ANKRD20A3Q5VUR7 823 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 SYT10Q6XYQ8 523 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 MACC1Q6ZN28 852 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 DPPA4Q7L190 304 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 KANSL1Q7Z3B3 1105 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 TSPAN33Q86UF1 283 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 PHACTR4Q8IZ21 702 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 RBFAQ8N0V3 343 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 TAB3Q8N5C8 712 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 KDF1Q8NAX2 398 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 TP53I13Q8NBR0 393 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 SCG3Q8WXD2 468 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 SPOCK2Q92563 424 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 GLMNQ92990 594 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 RTP4Q96DX8 246 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 MRGPRX2Q96LB1 330 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 APOLD1Q96LR9 279 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 C16orf45Q96MC5 204 aaPredicted RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 APOOQ9BUR5 198 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 POLR1EQ9GZS1 481 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 GOLGA6AQ9NYA3 693 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 B4GALT6Q9UBX8 382 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 KLQ9UEF7 1012 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 KLF15Q9UIH9 416 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 MOSPD1Q9UJG1 213 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 PHTF1Q9UMS5 762 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 CHKBQ9Y259 395 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 OR1A2Q9Y585 309 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 RAI2Q9Y5P3 530 aa8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 MAP1BP46821 2468 aaKnown RBP8.75□□□□□ -1.01
PDLIM5-213ENST00000509357 TCRBV7S3A2A0A539 114 aa8.74□□□□□ -1.01
PDLIM5-213ENST00000509357 CFAP69A5D8W1 941 aa8.74□□□□□ -1.01
PDLIM5-213ENST00000509357 TRABD2BA6NFA1 517 aa8.74□□□□□ -1.01
PDLIM5-213ENST00000509357 AURKAO14965 403 aa8.74□□□□□ -1.01
PDLIM5-213ENST00000509357 KRT37O76014 449 aa8.74□□□□□ -1.01
PDLIM5-213ENST00000509357 DKK1O94907 266 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms