RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 PRR11Q96HE9 360 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 NAF1Q96HR8 494 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 ZNF830Q96NB3 372 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 TSGA13Q96PP4 275 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 CMKLR1Q99788 373 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 TMEM168Q9H0V1 697 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 CDH19Q9H159 772 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 CARS2Q9HA77 564 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 ETNK2Q9NVF9 386 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 ZNHIT6Q9NWK9 470 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 SEPT10Q9P0V9 454 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 ACSL6Q9UKU0 697 aa13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 SMG1Q96Q15 3661 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-227ENST00000508852 A0A087X0T9 212 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 SYCE3A1L190 88 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 RHPN2P1A8MT19 583 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 A8MX80 341 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 B4DGG1 531 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 NVLO15381 856 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 CBFA2T2O43439 604 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 NOBOXO60393 691 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 IVLP07476 585 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 FAM228BP0C875 321 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 GM2AP17900 193 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 CD82P27701 267 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 HNRNPH3P31942 346 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 GPR1P46091 355 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 CDK3Q00526 305 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 TRAF2Q12933 501 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 TAF1BQ53T94 588 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 TMEM164Q5U3C3 297 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 RAET1GQ6H3X3 334 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 XKR5Q6UX68 686 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 ADAMTSL4Q6UY14 1074 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 CCDC81Q6ZN84 652 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 SPRED1Q7Z699 444 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 LUZP1Q86V48 1076 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 PIM3Q86V86 326 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 VSIG1Q86XK7 387 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 PGBD5Q8N414 524 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 CPLX3Q8WVH0 158 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 MAML1Q92585 1016 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 SEMA3CQ99985 751 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 FRMD8Q9BZ67 464 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 NT5MQ9NPB1 228 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 MRPL40Q9NQ50 206 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 CTTNBP2NLQ9P2B4 639 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 SLC17A4Q9Y2C5 497 aa13.58□□□□□ -0.24
CCHCR1-227ENST00000508852 ARHGEF17Q96PE2 2063 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 KIF26BQ2KJY2 2108 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 RGSL1A5PLK6 1076 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 GOLGA6CA6NDK9 693 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 GOLGA6BA6NDN3 693 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 ZNF487B1APH4 448 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 FZD6O60353 706 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 PROSCO94903 275 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 CPNE6O95741 557 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 CEACAM5P06731 702 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 GOLGA6DP0CG33 693 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 IL4RP24394 825 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 MAN1A1P33908 653 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 UGT1A5P35504 534 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 ETV3P41162 512 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 PDX1P52945 283 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 MAXP61244 160 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 ZFP36L1Q07352 338 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 LRP8Q14114 963 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 DPYSL3Q14195 570 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 NR1D2Q14995 579 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 SLC18A3Q16572 532 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 ANKRD20A8PQ5CZ79 823 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 ARHGAP40Q5TG30 622 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 DENND2CQ68D51 928 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 TECPR1Q7Z6L1 1165 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 C17orf82Q86X59 251 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 TP53INP2Q8IXH6 220 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 ZDHHC1Q8WTX9 485 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 PIH1D2Q8WWB5 315 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 AP2M1Q96CW1 435 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 CCNL2Q96S94 520 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 LGR4Q9BXB1 951 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 DEF6Q9H4E7 631 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 GOLGA6AQ9NYA3 693 aa13.57□□□□□ -0.24
CCHCR1-227ENST00000508852 A0A0J9YYE9 177 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 A0A1W2PQM1 296 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 NPIPB15A6NHN6 443 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 K7ENP7 123 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 HGSO14964 777 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 TRBC1P01850 177 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 GYPCP04921 128 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 TCF4P15884 667 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 LHCGRP22888 699 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 ARHGAP25P42331 645 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 GNPDA1P46926 289 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 ARSEP51690 589 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 TRA2AQ13595 282 aaKnown RBP eCLIP13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 SKOR2Q2VWA4 1001 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 ZFYVE27Q5T4F4 411 aa13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 INO80CQ6PI98 192 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-227ENST00000508852 Q6ZVL8 140 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms