RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 FAM118BQ9BPY3 351 aa9.38□□□□□ -0.91
DDX41-209ENST00000508279 MLPHQ9BV36 600 aaPredicted RBP9.38□□□□□ -0.91
DDX41-209ENST00000508279 CLPBQ9H078 707 aa9.38□□□□□ -0.91
DDX41-209ENST00000508279 ABCG4Q9H172 646 aa9.38□□□□□ -0.91
DDX41-209ENST00000508279 C10orf88Q9H8K7 445 aa9.38□□□□□ -0.91
DDX41-209ENST00000508279 FGF22Q9HCT0 170 aa9.38□□□□□ -0.91
DDX41-209ENST00000508279 PHPT1Q9NRX4 125 aaPredicted RBP9.38□□□□□ -0.91
DDX41-209ENST00000508279 EVA1BQ9NVM1 165 aa9.38□□□□□ -0.91
DDX41-209ENST00000508279 KLHL8Q9P2G9 620 aaPredicted RBP9.38□□□□□ -0.91
DDX41-209ENST00000508279 AMFRQ9UKV5 643 aa9.38□□□□□ -0.91
DDX41-209ENST00000508279 PACSIN2Q9UNF0 486 aaPredicted RBP9.38□□□□□ -0.91
DDX41-209ENST00000508279 PCDHGA1Q9Y5H4 931 aa9.38□□□□□ -0.91
DDX41-209ENST00000508279 CSNK1G3Q9Y6M4 447 aa9.38□□□□□ -0.91
DDX41-209ENST00000508279 GRID2IPA4D2P6 1211 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 CAPN8A6NHC0 703 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 PSMD11O00231 422 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 INPP4BO15327 924 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 YY2O15391 372 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 DKK1O94907 266 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 FTCDO95954 541 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 PRLP01236 227 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 C1SP09871 688 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 CKMT1AP12532 417 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 ZNF30P17039 623 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 KELP23276 732 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 CTNNA1P35221 906 aaKnown RBP9.37□□□□□ -0.91
DDX41-209ENST00000508279 CETN2P41208 172 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 TNNT3P45378 269 aaPredicted RBP9.37□□□□□ -0.91
DDX41-209ENST00000508279 GNPDA1P46926 289 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 RWDD2BP57060 319 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 KIAA1024LP59773 190 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 CDK3Q00526 305 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 PTSQ03393 145 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 TARDBPQ13148 414 aaKnown RBP eCLIP9.37□□□□□ -0.91
DDX41-209ENST00000508279 PRKD1Q15139 912 aaPredicted RBP9.37□□□□□ -0.91
DDX41-209ENST00000508279 NR0B2Q15466 257 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 SMAD1Q15797 465 aaKnown RBP9.37□□□□□ -0.91
DDX41-209ENST00000508279 QPCTQ16769 361 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 TEX44Q53QW1 395 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 CCDC70Q6NSX1 233 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 GUSBP11Q6P575 273 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 PID1Q7Z2X4 250 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 EFL1Q7Z2Z2 1120 aaKnown RBP9.37□□□□□ -0.91
DDX41-209ENST00000508279 PEX26Q7Z412 305 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 TAF8Q7Z7C8 310 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 TRIM74Q86UV6 250 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 TMPRSS12Q86WS5 348 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 GKN2Q86XP6 184 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 TXLNBQ8N3L3 684 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 MDM1Q8TC05 714 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 MAPK15Q8TD08 544 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 CCHCR1Q8TD31 782 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 SCG3Q8WXD2 468 aaKnown RBP9.37□□□□□ -0.91
DDX41-209ENST00000508279 GLMNQ92990 594 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 SCAMP4Q969E2 229 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 CALR3Q96L12 384 aaKnown RBP9.37□□□□□ -0.91
DDX41-209ENST00000508279 MCCC1Q96RQ3 725 aaPredicted RBP9.37□□□□□ -0.91
DDX41-209ENST00000508279 ADGRE3Q9BY15 652 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 BRD8Q9H0E9 1235 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 TMEM168Q9H0V1 697 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 SLC25A51Q9H1U9 297 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 ABCG8Q9H221 673 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 CARS2Q9HA77 564 aaKnown RBP9.37□□□□□ -0.91
DDX41-209ENST00000508279 GLOD4Q9HC38 313 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 ZMIZ1Q9ULJ6 1067 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 GPR34Q9UPC5 381 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 SHOC2Q9UQ13 582 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 PPIL1Q9Y3C6 166 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 PCDHA3Q9Y5H8 950 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 CEP295Q9C0D2 2601 aa9.37□□□□□ -0.91
DDX41-209ENST00000508279 UNC13CQ8NB66 2214 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 LY6G6EA0A0G2JKS1 128 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 PRSS38A1L453 326 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 CCDC66A2RUB6 948 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 TRABD2BA6NFA1 517 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 BTNL10A8MVZ5 291 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 B4DGG1 531 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 ANKRD66B4E2M5 251 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 LMO7DNF2Z398 122 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 PDE2AO00408 941 aaPredicted RBP9.36□□□□□ -0.91
DDX41-209ENST00000508279 TPP1O14773 563 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 PJA2O43164 708 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 ASMTLO95671 621 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 CDK4P11802 303 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 MYCLP1P12525 358 aaPredicted RBP9.36□□□□□ -0.91
DDX41-209ENST00000508279 NFKB1P19838 968 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 TRIM23P36406 574 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 POLD2P49005 469 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 RPIAP49247 311 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 STC1P52823 247 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 E2F1Q01094 437 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 INSM1Q01101 510 aaPredicted RBP9.36□□□□□ -0.91
DDX41-209ENST00000508279 OTUD4Q01804 1114 aaKnown RBP9.36□□□□□ -0.91
DDX41-209ENST00000508279 CDK18Q07002 472 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 ILKQ13418 452 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 PPP2R5EQ16537 467 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 TAZQ16635 292 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 C6orf132Q5T0Z8 1188 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 ALS2CLQ60I27 953 aa9.36□□□□□ -0.91
DDX41-209ENST00000508279 BBS12Q6ZW61 710 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms