RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 METTL6Q8TCB7 284 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 NRCAMQ92823 1304 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 PBXIP1Q96AQ6 731 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 PYCR2Q96C36 320 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 ULK4Q96C45 1275 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 HNRNPABQ99729 332 aaKnown RBP9.6□□□□□ -0.87
PHF3-208ENST00000506783 MYOCQ99972 504 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 RTKNQ9BST9 563 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 KATNAL1Q9BW62 490 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 CATSPERBQ9H7T0 1116 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 CCSER2Q9H7U1 834 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 HMX1Q9NP08 348 aaPredicted RBP9.6□□□□□ -0.87
PHF3-208ENST00000506783 DNAJB4Q9UDY4 337 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 BCAP29Q9UHQ4 241 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 RRN3P2A6NIE6 340 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 EI24O14681 340 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 DAB1O75553 588 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 CABYRO75952 493 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 IPO13O94829 963 aaKnown RBP9.6□□□□□ -0.87
PHF3-208ENST00000506783 GOT2P00505 430 aaKnown RBP9.6□□□□□ -0.87
PHF3-208ENST00000506783 BMP1P13497 986 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 SLC2A4P14672 509 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 PNPLA4P41247 253 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 HMGCS1Q01581 520 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 PWP1Q13610 501 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 ARHGEF7Q14155 803 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 FBXO39Q8N4B4 442 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.6□□□□□ -0.87
PHF3-208ENST00000506783 ZNF419Q96HQ0 510 aaPredicted RBP9.6□□□□□ -0.87
PHF3-208ENST00000506783 GPR21Q99679 349 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 ZBED2Q9BTP6 218 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 WDR6Q9NNW5 1121 aaKnown RBP9.6□□□□□ -0.87
PHF3-208ENST00000506783 PKP3Q9Y446 797 aa9.6□□□□□ -0.87
PHF3-208ENST00000506783 GPR32O75388 356 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 ZNF682O95780 498 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 SLC2A3P11169 496 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 ODC1P11926 461 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 ATP5F1P24539 256 aaPredicted RBP9.59□□□□□ -0.87
PHF3-208ENST00000506783 KCNK10P57789 538 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 TUBB3Q13509 450 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 CARNMT1Q8N4J0 409 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 SIDT2Q8NBJ9 832 aaKnown RBP9.59□□□□□ -0.87
PHF3-208ENST00000506783 RP9Q8TA86 221 aaKnown RBP9.59□□□□□ -0.87
PHF3-208ENST00000506783 HGH1Q9BTY7 390 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 GPR63Q9BZJ6 419 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 MARCH2Q9P0N8 246 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 MID2Q9UJV3 735 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 PCDHB9Q9Y5E1 797 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 SF3B1O75533 1304 aaKnown RBP eCLIP9.59□□□□□ -0.872e-6■■■■■ 87.1
PHF3-208ENST00000506783 C7orf72A4D263 438 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 HACD1B0YJ81 288 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 DCLK1O15075 740 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 MTX2O75431 263 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 C1QAP02745 245 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 ASGR1P07306 291 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 LTA4HP09960 611 aaKnown RBP9.59□□□□□ -0.87
PHF3-208ENST00000506783 UGT1A1P22309 533 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 UGT1A4P22310 534 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 UGT1A3P35503 534 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 UGT1A5P35504 534 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 RPL5P46777 297 aaKnown RBP9.59□□□□□ -0.87
PHF3-208ENST00000506783 GEMP55040 296 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 ADARP55265 1226 aaKnown RBP9.59□□□□□ -0.87
PHF3-208ENST00000506783 FAM189BP81408 668 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 FAM180BQ6P0A1 224 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 GCNT7Q6ZNI0 430 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 TTC39CQ8N584 583 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 LMNTD1Q8N9Z9 388 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 SDCCAG3Q96C92 435 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 TRAPPC9Q96Q05 1148 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 MIR1-1HGQ9H1L0 117 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 EML4Q9HC35 981 aaKnown RBP9.59□□□□□ -0.87
PHF3-208ENST00000506783 LIMD1Q9UGP4 676 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 EIF2B4Q9UI10 523 aaKnown RBP9.59□□□□□ -0.87
PHF3-208ENST00000506783 CCDC162PA2VCL2 907 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 TRPC5OSA6NMA1 111 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 PIRO00625 290 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 OR4F21O95013 312 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 NPY2RP49146 381 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 GNA12Q03113 381 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 FPGSQ05932 587 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 SULT2A1Q06520 285 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 BNIP3Q12983 259 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 PGS1Q32NB8 556 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 ATXN7L2Q5T6C5 722 aaPredicted RBP9.59□□□□□ -0.87
PHF3-208ENST00000506783 ANKRD34AQ69YU3 496 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 GDF6Q6KF10 455 aaPredicted RBP9.59□□□□□ -0.87
PHF3-208ENST00000506783 FAM151BQ6UXP7 276 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 ZYG11AQ6WRX3 759 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 GLT6D1Q7Z4J2 308 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 LINC00523Q86TU6 105 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 ZDHHC17Q8IUH5 632 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 CRYBG2Q8N1P7 616 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 C2orf73Q8N5S3 287 aaPredicted RBP9.59□□□□□ -0.87
PHF3-208ENST00000506783 NAA50Q9GZZ1 169 aaKnown RBP9.59□□□□□ -0.87
PHF3-208ENST00000506783 DRC3Q9H069 523 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 ADAMTS10Q9H324 1103 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 SPAG4Q9NPE6 437 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 RNF186Q9NXI6 227 aa9.59□□□□□ -0.87
PHF3-208ENST00000506783 SOCS2O14508 198 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms