RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 TCEA3O75764 348 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 DXOO77932 396 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 LCA5LO95447 670 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 FUCA1P04066 466 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 CEACAM5P06731 702 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 MMP2P08253 660 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 CTPS1P17812 591 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 STC1P52823 247 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 PDX1P52945 283 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 RPL26P61254 145 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 SKOR1P84550 965 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 CDK3Q00526 305 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 PTSQ03393 145 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 ITKQ08881 620 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 ZBTB17Q13105 803 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 ARHGEF7Q14155 803 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 TAZQ16635 292 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 LRRC66Q68CR7 880 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 IGF2-ASQ6U949 168 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 RFLNAQ6ZTI6 216 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 ZNF765Q7L2R6 523 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 RD3Q7Z3Z2 195 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 NLRP8Q86W28 1048 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 HEATR4Q86WZ0 1026 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 RAVER1Q8IY67 606 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 NDUFAF2Q8N183 169 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 WDR48Q8TAF3 677 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 GPBAR1Q8TDU6 330 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 GRAMD1AQ96CP6 724 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 SCARF2Q96GP6 870 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 CCDC3Q9BQI4 270 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 TMEM168Q9H0V1 697 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 ABCG4Q9H172 646 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 ABCG8Q9H221 673 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 PHPT1Q9NRX4 125 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 HAUS2Q9NVX0 235 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 RABGEF1Q9UJ41 708 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 DNPEPQ9ULA0 475 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 RPL26L1Q9UNX3 145 aaKnown RBP9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 GPR34Q9UPC5 381 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 CHKBQ9Y259 395 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 SLC17A4Q9Y2C5 497 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 ENTPD2Q9Y5L3 495 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 AK5Q9Y6K8 562 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 CELSR3Q9NYQ7 3312 aa9.06□□□□□ -0.96
PDLIM5-209ENST00000506632 IGSF10Q6WRI0 2623 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 APOL1O14791 398 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 USP12O75317 370 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 JCHAINP01591 159 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 KRT1P04264 644 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 KRT10P13645 584 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 COMTP21964 271 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 CA4P22748 312 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 EIF2S3P41091 472 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 CDKN2BP42772 138 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 LSSP48449 732 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 PDK1Q15118 436 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 TCEA2Q15560 299 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 COL28A1Q2UY09 1125 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 TBC1D25Q3MII6 688 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 CERCAMQ5T4B2 595 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 ZFYVE27Q5T4F4 411 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 DENND2CQ68D51 928 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 C19orf48Q6RUI8 117 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 MFSD7Q6UXD7 560 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 NPNTQ6UXI9 565 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 ADAMTSL4Q6UY14 1074 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 RBM44Q6ZP01 1051 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 C17orf82Q86X59 251 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 NRROSQ86YC3 692 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 SFTPA2Q8IWL1 248 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 RHOT1Q8IXI2 618 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 CCNYQ8ND76 341 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 OR6C4Q8NGE1 309 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 CCL4L1Q8NHW4 92 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 PTCD2Q8WV60 388 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 HNRNPLLQ8WVV9 542 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 FGF11Q92914 225 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 SCAMP4Q969E2 229 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 CCDC74AQ96AQ1 378 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 TADA1Q96BN2 335 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 HIC2Q96JB3 615 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 ZNF830Q96NB3 372 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 TRIB3Q96RU7 358 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 WDR24Q96S15 920 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 TRIM5Q9C035 493 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 BRD8Q9H0E9 1235 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 POLR1BQ9H9Y6 1135 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 PCDH9Q9HC56 1237 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 CYP4F12Q9HCS2 524 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 ASCL3Q9NQ33 180 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 TRNAU1APQ9NX07 287 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 DDX56Q9NY93 547 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 SIRPGQ9P1W8 387 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 GULP1Q9UBP9 304 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 DOLKQ9UPQ8 538 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 BOLA1Q9Y3E2 137 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 HYOU1Q9Y4L1 999 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 HEY1Q9Y5J3 304 aa9.05□□□□□ -0.96
PDLIM5-209ENST00000506632 ALG6Q9Y672 507 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms